KEGG   Rhodopseudomonas palustris BisB18: RPC_0751Help
Entry
RPC_0751          CDS       T00336                                 

Definition
(GenBank) ATP dependent DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
rpc  Rhodopseudomonas palustris BisB18
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:rpc00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    RPC_0751
   03410 Base excision repair
    RPC_0751
   03420 Nucleotide excision repair
    RPC_0751
   03430 Mismatch repair
    RPC_0751
Enzymes [BR:rpc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     RPC_0751
    6.5.1.6  DNA ligase (ATP or NAD+)
     RPC_0751
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     RPC_0751
DNA replication proteins [BR:rpc03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    RPC_0751
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     RPC_0751
DNA repair and recombination proteins [BR:rpc03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     RPC_0751
   NER (nucleotide excision repair)
    Other NER factors
     RPC_0751
   MMR (mismatch exicision repair)
    Other MMR factors
     RPC_0751
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
828091..829827
Genome map
AA seq 578 aa AA seqDB search
MNRFAELLDRLAYEPGRNAKLRLITSYLHGTEDPDRGYALAALTGALSFKHAKSGLIREL
IAARTDPVLFALSYDYVGDLSETVALMWPTSFSPPQRDVSVFPPRKGEGAGRALSARNDP
TPTLTEVVTTLATLGKAELPAQLARWLDELDETGRWAILKLVTGSLRIGISARLAKTAAA
ALGNKDPHDLELIWPGLAPPYLELFAWLEGRAEKPINADPAPFRPVMLAHAIEDADFNTL
DAADYIAEWKWDGIRVQAVSGRDQHGHLISRLYSRTGEDISQSFPDLLPSLRRPGAIDGE
LLVLRENRVQSFNVLQQRLNRKSVTPKLLKDYPIHLRAYDLLGDGEVDLRTLPFEQRRAR
LECFIAELNDRRIDLSATIPFADWQALTAARQAPANAGAGLDAAAVEGVMLKRRDAPYLP
GRPKGQWWKWKHDPHVIDAVLMYAQRGHGKRSSYYSDYTFGVWTSGEGGDVLVPVGKAYF
GFTDEELLQIDRFVRRNTTEKFGPVRHVVHEPDQGLVLEVAFEGLARSPRHKSGVAMRFP
RISRLRWDKPPRDADRLETLQRLLTAEAAIPPAAASGH
NT seq 1737 nt NT seq  +upstreamnt  +downstreamnt
atgaaccgcttcgccgaactgctcgatcgcctcgcctatgagcccggccgcaacgccaag
ctgcggttgatcaccagctatctgcacggcaccgaagatcccgaccgcggctacgcgttg
gcggcgctgaccggggcgctgtcgttcaagcacgccaagtcggggctgatccgcgaactg
atcgccgcgcggaccgacccggtgctgttcgcattgtcctacgattacgtcggcgatctg
tcggaaaccgtggcgctgatgtggcccacgtccttctcccctccgcaacgcgacgtgtcc
gtcttccctccccgcaagggggagggagcaggccgtgcacttagcgcgcgcaatgacccg
acgccgacgctgaccgaagtcgtcacgaccctcgcgacgctcggcaaggctgaactgccg
gcgcagttggcgcgctggctcgacgaactcgacgagaccgggcgctgggctatcttgaag
ctcgtcaccggcagtctgcggatcggcatctcggcgcggctggcgaagaccgcggccgca
gccctcggtaacaaggatccgcacgacctcgaactgatctggccggggctcgcgccgccc
tatctcgaattgttcgcctggctggaaggccgcgccgaaaaaccgatcaatgccgatccg
gcgccgtttcggccggtgatgctggcccatgccattgaggacgccgacttcaacacgctc
gacgccgccgattacatcgccgaatggaaatgggatggcatccgggttcaggcggtcagc
ggtcgtgaccaacacggccacctcatctcgcggctgtattcgcggactggcgaggacatc
tcccagagctttccggatctgttgccgtcgctgcggcggcccggcgcgatcgacggtgaa
cttctggtcttgcgcgaaaaccgcgtgcagtcgtttaacgtgctgcagcagcggctcaac
cgcaagagcgtgacgccgaagctcttgaaggactatccgatccacctccgcgcctacgac
ctgctcggcgacggcgaggtggatctgcgcacgctgccgttcgaacagcgtcgcgcgagg
ctcgaatgctttatcgccgaattgaacgatcggcgcatcgacctgtcggcgacgatcccg
ttcgccgattggcaggcgctcaccgcggcgcgccaagctccggccaacgccggagccggt
ctcgacgccgccgcggtcgagggcgtgatgctgaagcgccgcgacgcgccgtatctgccg
ggccggccgaaggggcaatggtggaagtggaagcacgacccgcacgtcatcgacgcggtg
ctgatgtatgcgcagcgcggccatggcaagcgctcgtcgtattattccgactataccttc
ggggtgtggacgagcggcgaaggcggcgacgtgctggtgccggtcggcaaggcgtatttc
gggttcaccgacgaagagttgctgcagatcgaccgcttcgtccgccgcaacaccaccgag
aaattcggcccggtccgccatgtggtgcacgagcccgatcaaggcctggtgctggaagtg
gcgttcgagggcttggcgcgctcgccgcggcacaaatccggggtggcgatgcggtttccg
cggatcagccggctgcgctgggacaagccgccgcgcgacgccgatcgcctggagacgctg
caacggctattgaccgcggaggccgcaattccgcccgccgcggcgtccggccattga

DBGET integrated database retrieval system