Rhodopseudomonas palustris BisB18: RPC_1350
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Entry
RPC_1350 CDS
T00336
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00061
Fatty acid biosynthesis
rpc00071
Fatty acid degradation
rpc01100
Metabolic pathways
rpc01212
Fatty acid metabolism
rpc02024
Quorum sensing
Module
rpc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPC_1350
00071 Fatty acid degradation
RPC_1350
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPC_1350
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpc01004
]
RPC_1350
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpc04147
]
RPC_1350
Enzymes [BR:
rpc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPC_1350
Lipid biosynthesis proteins [BR:
rpc01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
RPC_1350
Exosome [BR:
rpc04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPC_1350
Exosomal proteins of breast cancer cells
RPC_1350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABD86912
UniProt:
Q219M4
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All DBs
Position
1470289..1471812
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AA seq
507 aa
AA seq
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MPEFISLDALVRQTAAEAPQRSAVIDGDRTINYAEFDDLIDRVAASLQADGLQPRDVIAI
CALSSIEYVVTFLGALRAGVAVAPLAPSSLPRDFAAMLEDSGAKILFMDATTIAAMGDAA
QAALQVSFDDAGWGRPFSAWCAAPGSKPKPITIDPEWIFNIIYSSGTTGTPKGIVHTHEL
RWRQYGQIDPLGFGPDAVTLLSTPLYSNTTLVCFNPTLAGGGGLVLMKKFDARGFLELSE
THRVSFTMLVPVQYRRIMALPDFDRFDLSSYKMKFCTSAPFAAELKADILKRWPGGLVEY
YGMTEGGGSCALLAHEHPDKLATVGRPMPGHEVRLIDEEGRQVAVGQIGEIVGRSPVMMQ
GYLNQPGKTAETFWHDAEGNRFVRTGDIGRFDDDGFLTLMDRKKDMIISGGFNIYPSDIE
GVLAAHPDVVEVAVVGMPSEEWGETPVAFVVLRADASLDVAALKAWTNARVGKTQRLNDL
VVVESLPRSAIGKVLKRELRDLRQAAQ
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttcatcagcctcgacgcgctggtccgccaaaccgccgccgaggcgccgcag
cgcagcgcggtgatcgatggcgaccgcacgatcaactacgccgaattcgacgacctgatc
gaccgcgtcgcagcgtccttgcaggccgacggcttgcagccgcgcgacgtgatcgcgatc
tgcgcgctgagttcgatcgaatatgtcgtgacgttcctcggtgcgctgcgcgccggcgtc
gcggtggcaccgttggcgccgtcgtccttgccgcgggatttcgcggcgatgctcgaggat
tccggcgccaagatcctgttcatggatgcgaccaccatagctgcgatgggcgacgccgcg
caggcggcgctgcaagtgtcgttcgatgacgccggctggggccggccgttcagcgcctgg
tgcgccgcgcccggcagcaagcccaagcccatcaccatcgatccggagtggatcttcaac
atcatctattcctccggcaccacaggaacacccaaaggcatcgtgcacacccacgagctg
cgctggcggcaatacggccagatcgatccgctcggcttcggccccgacgccgtgacgctg
ttgtcgacgccgctttattccaacaccacgctggtgtgcttcaacccgaccctggccggc
ggcggcggcctcgtcctgatgaagaaattcgacgcccgcggcttcttggaattgagcgag
acgcatcgcgtctccttcaccatgctggtgccggtgcagtatcgccgcatcatggcgctg
ccggatttcgaccgcttcgatctgtcgtcctacaagatgaagttctgcacctcggcgccg
ttcgcggccgagctcaaggccgacatcctgaagcgctggcccggcgggctggtcgaatat
tacggcatgaccgaaggcggcggctcctgcgcgctgctcgcgcacgagcatcccgacaag
ctcgccaccgttggccggccgatgcccggccacgaagtgcggctgatcgacgaggaaggg
cggcaggtcgcggtcgggcagatcggcgagatcgtcggccgctcgccggtgatgatgcag
ggttatctcaaccagccgggcaagaccgccgagaccttctggcacgacgccgagggcaac
cgcttcgtgcgcaccggcgacatcggccggttcgacgacgacggcttcctcaccctgatg
gaccgcaagaaggacatgatcatttccggcggcttcaacatctatcccagcgacatcgag
ggcgtgctcgccgcgcatcccgacgtcgtcgaggtggcggtggtcggcatgccgtcggag
gaatggggcgagaccccggtggcgttcgtggtgctgcgggccgacgcgtcgctcgatgtc
gctgcgttgaaggcctggaccaacgctcgggtcggcaagacccagcggctcaacgatctc
gtcgtggtggaaagcttgccgcgcagcgcgatcggcaaggtgttgaagcgcgaattgcgc
gacctgcggcaagcggcgcagtga
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