Rhodopseudomonas palustris BisB18: RPC_2967
Help
Entry
RPC_2967 CDS
T00336
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00061
Fatty acid biosynthesis
rpc00071
Fatty acid degradation
rpc01100
Metabolic pathways
rpc01212
Fatty acid metabolism
rpc02024
Quorum sensing
Module
rpc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPC_2967
00071 Fatty acid degradation
RPC_2967
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPC_2967
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpc01004
]
RPC_2967
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpc04147
]
RPC_2967
Enzymes [BR:
rpc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPC_2967
Lipid biosynthesis proteins [BR:
rpc01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
RPC_2967
Exosome [BR:
rpc04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPC_2967
Exosomal proteins of breast cancer cells
RPC_2967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABD88512
UniProt:
Q213C4
LinkDB
All DBs
Position
complement(3247019..3248527)
Genome browser
AA seq
502 aa
AA seq
DB search
MRWHNLGDLVDRNRDLDREAIIDLVDRDHPRRYSHREIDRLANGVAKYLTEQGYARGSHI
AIASFNRAEYIVCYFGIMRAGCVAVPVNVKLPRDTIDYVMDDAKIQLAFVDAAHRPLVRE
GIKVIDFDDAGAGGFAGLIKPGEFESVKAAPDEIGQMLYTSGSTGRPKGVPLTHSGQLWA
IATRTGGALSDDERYVIAQPLFHMNGLFAIKTIFARNASVVLLPSFEVRSYIDAIATYHV
TAANAVPTMWARVVKEHQLLSTHDITSIRRLMLGSAPMTMALWDKIKQALPNVTITLGYG
TTEAGPAVFGPHPQGIPTPPMALGYPIDPDDVRLANGSESEGVLLMRNPALMPRYHNLPE
QTAKAISDGWYYSGDVMRRDTDGFYYFVGRADDMFVCSGENIYPGEVEKLLERHPQVQQA
VVVPLPDEERSQVPVAFIVSRAKAPPSFDEIRQFAIANGPAYQHPRRIEFVHELPWAGTN
KIDRKSLIDRARTLEANRGWSA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggcataatctcggagacttggtcgaccgcaatcgcgacctcgatcgcgaggcg
atcatcgatctggtcgatcgcgatcacccgcgccgctacagccatcgcgagatcgatcgg
ctggccaacggggtcgcgaagtatctcaccgagcagggctacgcccgcggtagccacatc
gcgatcgcgtcgttcaaccgcgccgaatacatcgtctgttatttcggcatcatgcgcgcc
ggctgcgtcgcggtgccggtcaacgtcaagctgccgcgcgacaccatcgattacgtgatg
gacgacgcgaaaatccagctcgccttcgtcgacgccgcgcaccggccactggtgcgcgag
ggcatcaaggtgatcgatttcgatgacgctggtgctggcggtttcgccgggttgatcaag
cccggcgagtttgagagcgtcaaggctgcgcccgacgaaatcggccagatgctttacacc
tccggctccaccggccgcccgaaaggcgtgccactgacgcattccgggcagctttgggcg
atcgcgacgcgcaccggcggcgcgctcagcgacgatgaacgctacgtcatcgcccagccc
ttgttccacatgaacgggctgttcgcgatcaagacgattttcgccaggaacgcctcagtg
gtgctgctgccgtcgttcgaggtgcgcagctacatcgatgccatcgcgacctatcatgtc
accgcggccaacgcggttccgacgatgtgggcgcgcgtcgtcaaagagcaccagctgctg
tcgacccacgatatcacgtcgatccggcggttgatgctgggttcggcgccgatgaccatg
gcgctgtgggacaagatcaaacaggcgctgccgaacgtcaccatcacgctcggttacggc
accaccgaggcggggccggcggtgttcggtccgcatccgcagggcatcccgacgccgccg
atggcgctcggctatccgatcgatccggacgacgtccggctggcgaacggcagcgagagc
gagggcgtgctgctgatgcgcaatccggcgctgatgccgcgctatcacaatctgccggag
cagaccgcgaaggcgatctccgacggctggtactacagcggcgacgtgatgcgccgcgac
accgacggcttctactattttgtcggccgcgccgacgacatgttcgtctgctccggcgaa
aacatctatcccggcgaggtcgagaagctgctggagcgacatccgcaggtgcagcaggcg
gtggtggtgccgctgcccgacgaggagcgcagccaggtgccggtcgccttcatcgtcagc
cgcgccaaggcgccgccgagtttcgacgagatccggcaattcgccattgccaacggcccg
gcctatcagcatccgcgccggatcgaattcgtccatgaattgccctgggccggcaccaac
aagatcgatcgcaagagcctgatcgatcgcgcgcggactctggaagccaatcgcgggtgg
tcggcgtga
DBGET
integrated database retrieval system