Rhodopseudomonas palustris BisB5: RPD_0462
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Entry
RPD_0462 CDS
T00345
Name
(GenBank) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00630
Glyoxylate and dicarboxylate metabolism
rpd00710
Carbon fixation in photosynthetic organisms
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
rpd01120
Microbial metabolism in diverse environments
rpd01200
Carbon metabolism
Module
rpd_M00165
Reductive pentose phosphate cycle (Calvin cycle)
rpd_M00612
Anoxygenic photosynthesis in purple bacteria
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RPD_0462
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
RPD_0462
Enzymes [BR:
rpd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
RPD_0462
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ABE37700
UniProt:
Q13DY9
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Position
complement(530582..531880)
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AA seq
432 aa
AA seq
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MTPDDIAGFYAKRSDLNLDDYIELDFDFECAGDPREAAAHLCSEQSTAQWRRVGVDEDFR
PRFAAKVLELHAEPRPSGFSTPVECAVRGEVHACRVTIAHPHGNFGPKIPNLLSAVCGEG
VFFSPGIPLIRLQDIRFPDSYLAAFAGPQFGVAGLRERLKAFDRPIFFGVIKPNIGLSAE
PFAELGYQSWLGGLDIAKDDEMLADVDWCPLAERAALLGDACRRAEAETGVPKIYLANIT
DEVDRLIELHDLAVSNGAGALLVNAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANY
GIHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVMDCVRACLEPMGPIKPCLPVPGGSD
SAATLESVYRKVGCADFGFVPGRGVFGHPMGPAAGAASIRQAWDAIASGIAVSDHAARHP
ELAAALRAFGGR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgactccggacgacattgcgggcttctacgcgaagcgctcggatctcaatctcgacgac
tacatcgagctggatttcgatttcgaatgcgccggcgatccgcgcgaggccgcggcgcat
ctgtgcagtgagcaatccaccgcgcaatggcgccgcgtcggcgtcgacgaggacttccgg
ccgcgctttgccgcgaaagtgctggagcttcacgccgagccgcggccgtcgggcttcagc
acgccggtcgaatgcgcggtgcgcggcgaggtgcatgcctgccgcgtgacgatcgcgcat
ccgcacggcaatttcggcccgaagattccgaatctgctgtcggccgtctgcggggaaggc
gtgttcttctcgccgggcattccgctgatccggctgcaggacatccggtttcccgacagc
tatctggccgcctttgccggcccgcaattcggcgtcgccggattgcgcgaacggctgaag
gctttcgatcggccgatcttcttcggcgtgatcaagccgaatatcgggttgtcggcggag
ccgttcgccgaactcggctatcagagctggctcggcgggctcgatatcgccaaggacgac
gagatgctcgccgacgtcgactggtgtccgctcgccgagcgcgcagcattgctcggcgac
gcctgccggcgcgcggaagccgagaccggcgtgccgaagatctatctggccaacatcacc
gacgaggtcgaccggctgatcgagctgcacgatctcgcggtcagcaacggcgccggcgcg
ctgctggtcaatgcgatgccggtcggcctttcggcggtgcggatgctgcgcaagcacgcc
accgtgccgctgattgcgcatttcccgttcatcgcggcgttcagccggctcgccaattac
ggcattcattcgcgggtgatgacgcggctgcagcggctggcgggtttcgacgtggtgatc
atgccgggcttcgggccacggatgatgacgccggagcacgaggtgatggactgcgtgcgg
gcctgtctggagccgatggggccgatcaagccgtgcctgccggtgccgggcggcagcgat
tccgcggcaacgctggagtcggtgtatcgcaaggtcggctgcgccgatttcggtttcgtg
ccgggccgcggcgtgttcggccatccgatgggaccggccgcgggcgcggcctcgatccgt
caggcctgggatgcgatcgcctccggcattgcggtcagcgaccacgccgcccgccatccg
gaactggcggcggcgttgcgggcgttcggcggccgctga
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