Rhodopseudomonas palustris BisB5: RPD_0793
Help
Entry
RPD_0793 CDS
T00345
Name
(GenBank) ATP dependent DNA ligase
Organism
rpd
Rhodopseudomonas palustris BisB5
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
ABE38031
UniProt:
Q13D08
LinkDB
All DBs
Position
complement(889466..891358)
Genome browser
AA seq
630 aa
AA seq
DB search
MNRFAELLDRLAYEPGRNNKLRLITNYFRATEDPDRGYALAALTGALSFRHAKPGLIREL
IAARTDPVLFGLSYDYVGDLSETVALMWPTPRNTAVSTPAGGASSPPPGSASSPPPCGEG
SGVGGHSGTPSSWHPHPNPLPQAGEGARSAWGEDRDSELSAATSPGHNNPPPPSLTEIVT
TLHSLGKAELPAQLTRWLDELDETGRWALLKLVTGGLRIGVSARLAKTAAAALGDKDPHD
VELMWPGLDAPYLDLFAWLEGRGPQPVNRDPAPFRPVMLAHALEDTDFAAMNAADYIAEW
KWDGIRVQAVSGVGDDGDTIVRLYSRSGEDITRSFPDLLPSLRLPGAIDGELLVLRESRV
QSFNVLQQRLNRKSVTPKLIKEYPIHLRAYDLLGEGDDDLRTLTFAERRARLEAFVARLD
EPKIDLSPMVTFADWDDLHAARRDPASAGAGLDADAVEGVMLKRRDAPYLPGRPKGQWWK
WKHDPHIIDAVLMYAQRGHGKRSSYYSDYTFGVWTAGDGGDQLVPVGKAYFGFTDEELLQ
IDRFVRRNTTEKFGPVRHVVHEPDQGLVLEVAFEGLQRSPRHKSGVAMRFPRISRLRWDK
PPRDADRLETLERMLKADGAIPSAAPARGH
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcttcgccgaactgctcgaccgtctggcctacgagcccggccgcaacaacaag
ctgcggctgatcaccaattacttccgcgccaccgaagaccccgatcgcggctatgcgctc
gcggcgctgaccggcgcgctgtcgttccgccacgccaagcccggcctgatccgcgaactg
atcgccgcccgtaccgatccggtgctgttcggcctttcatatgattacgtcggcgatctg
tcggagacggtggcgctgatgtggccgacgccgcgcaatacggccgtctccactcccgct
ggcggagcctcttcccctccccccggctcggcctcctcccctcccccttgcggggagggg
tcgggggtggggggccacagcgggacgccatcctcgtggcaccctcaccccaaccctctc
ccgcaagcgggagagggagcgcgcagtgcttggggcgaggaccgtgattcagaactaagc
gccgcaacgagccccggccacaacaatccaccgcccccgtcgctcaccgagatcgtcacc
acgctgcacagcctcggcaaggccgagctgccggcgcagctcacgcgctggctcgacgag
ctggatgaaaccggccgctgggcgctgctgaagctcgtcaccggcggcctgcggatcggc
gtctcggcgcggctggcgaagaccgcagcggccgcgctcggcgacaaggacccgcacgac
gtcgagctgatgtggcccggactcgatgcaccctatctcgatctgttcgcctggctggaa
ggccgcgggccccaaccggtcaatcgcgatccggcgccgtttcgcccggtgatgctggcg
catgcgctcgaggacaccgacttcgccgcgatgaatgccgccgactacatcgccgaatgg
aaatgggacggcatccgcgtgcaggcggtgagcggcgttggtgatgatggcgacaccatc
gtacggctgtattcgcgcagcggcgaggacatcacgaggagcttccccgacttgctgccg
tcgctgcgattaccgggcgcgatcgacggcgagttgctggtgttgcgcgagagccgggtg
cagtcgttcaacgtgctgcagcagcggctcaaccgcaaatcggtgacgccgaagctgatc
aaggagtatccgatccatctgcgcgcctacgacctgctcggcgagggcgacgacgatctg
cgtacgttgacgtttgccgaacgccgcgcacggctggaggcgttcgtcgcacggctcgac
gaacccaagatcgacctgtctccgatggtgacattcgccgactgggatgatttgcacgcg
gcgcggcgcgatcccgccagcgccggagccggcctcgatgccgacgcggtcgagggcgtg
atgctgaagcggcgcgatgcgccgtatctgcccggccgcccgaaaggccaatggtggaag
tggaaacacgatccccacatcatcgacgcggtgctgatgtatgcccagcgcggccatggc
aagcgctcgtcttattattcggactacaccttcggggtctggaccgcaggcgacggcggc
gatcagctcgtcccggtcggcaaggcgtatttcggctttaccgacgaggaattgctgcag
atcgaccgcttcgtccgccgcaacaccaccgaaaaattcggcccggtccgccatgtcgtg
cacgaacccgatcagggccttgtgctggaagtcgctttcgaggggctgcagcgctcgccg
cggcacaaatccggcgtggcgatgcgttttccgcggatcagccggctgcgctgggacaag
ccgccgcgcgacgccgaccggctggagacgctggagcggatgttgaaggccgacggcgcg
attccatccgcggcgcccgcccgcggccattga
DBGET
integrated database retrieval system
