Rhodopseudomonas palustris BisB5: RPD_0917
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Entry
RPD_0917 CDS
T00345
Name
(GenBank) alpha amylase, catalytic region
KO
K01187
alpha-glucosidase [EC:
3.2.1.20
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00052
Galactose metabolism
rpd00500
Starch and sucrose metabolism
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
RPD_0917
00500 Starch and sucrose metabolism
RPD_0917
Enzymes [BR:
rpd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.20 alpha-glucosidase
RPD_0917
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GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
Malt_amylase_C
Complex1_LYR
GHL5
Motif
Other DBs
NCBI-ProteinID:
ABE38155
UniProt:
Q13CN4
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Position
1034576..1036204
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AA seq
542 aa
AA seq
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MDNVVSPSWWAAGVLYQIYPRSFQDSDADGIGDLRGIIDRLDYLSDLGVDAIWLSPIFPS
PMADFGYDVADYVGIDPIFGSMADFDALMITAHARGLKVILDLVPNHSSDQHPWFVESRA
SRDNPKRDWYLWRDPAPGGGPPTNWLSEFGGSAWDYDEATGQYYYHAFLAQQPDLNWRNP
QVRAAIYDAMRFWLRKGVDGFRVDVIWHLIKDDMFRDNPPNPEFSPDMPPHAALLPVYSV
DRPETLEIVAEMRAVLDEFDQRLLIGEIYLPIERLVAYYGADTQGRLQGAQLPFNFALLS
TPWRAPAIAALIARYEAALPEGAWPNWVLGNHDRPRVASRVGEAQARVAAMLLLTLRGTP
TLYYGDELGMTQVAIAPQDVRDPFEKNVPGIGVGRDGCRTPMQWDASANAGFSDARPWLP
LAPDAAPDNVANLRADAQSILNLYRALLRLRRRLPQLAQGAYQPLAAEGDLLLYRRHDQG
QSVLVALNLGADPVSVGSDAFGLDGEVLLSTFMDRAGERIGATLDLRGDEGVIVGRAPEP
VV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggacaatgtggtgagcccgtcctggtgggcggccggcgtgctgtaccagatctacccg
cgttcgtttcaggacagtgacgccgacggcatcggcgatctgcgcggaatcatcgaccgg
ctcgactatctgtccgatctcggcgtcgacgcgatctggctgtcgccgatctttccatcg
ccgatggcggatttcggctacgacgtcgccgactatgtcgggatcgatccgatcttcggc
agcatggcggatttcgacgcgctgatgatcacggcccatgcgcgcgggctcaaggtcatt
ctcgatctggtgccgaaccattcgtccgatcagcatccgtggttcgtcgaaagccgcgcc
tcgcgggacaatcccaagcgcgactggtatctgtggcgcgatcctgcgccgggcggcggc
ccgccgaccaactggctgtcggaattcggcggcagcgcttgggactacgacgaagccacc
ggccaatattactatcacgccttcctcgcgcagcagccggacctgaactggcgcaacccg
caggtgcgcgccgcgatctacgacgcgatgcggttctggctgcgcaagggcgtcgacggt
ttccgcgtcgacgtgatctggcatctgatcaaggacgacatgttccgcgacaacccgccc
aatccggagttttcgcccgacatgccgccgcacgccgcgctgctgccggtctactccgtg
gaccggccggagacgctggagatcgtcgccgagatgcgcgcggtgctcgacgaattcgac
cagcgcctgttgatcggcgagatctatctgccgatcgagcggctggtcgcgtattacggc
gcggacacgcagggcaggttgcaaggcgcgcagttgccgttcaacttcgcgctgctgtcg
acgccatggcgcgcgcccgccatcgcggcgctgatcgcgcgctacgaggcggcgcttccg
gagggcgcgtggcccaactgggtgctcggcaatcacgaccggccgcgggtcgccagccgg
gtcggcgaggcgcaggcgcgggtcgcggcgatgctgctgctgacgctgcgcggcacgccg
acgctgtattatggcgacgaactcggcatgactcaggtggcgatcgcgccgcaggatgtg
cgggacccgttcgagaagaacgtccccggcatcggcgtcggccgcgacggctgtcgcacg
ccgatgcagtgggacgcctcggccaatgccggtttctccgacgccaggccgtggctgccg
ctggcgccggacgcggcgccggacaacgtcgccaatctgcgcgccgacgcgcagtcgatc
ctcaatttgtatcgcgcgctgctgcggctgcgccgccggctgccgcaactggcgcaaggc
gcttaccagccgctcgccgcggaaggcgatctattgctgtatcgccggcatgatcagggg
cagtcggtgctggtcgcgctcaatctcggcgccgatccggtgtcggtcggctccgacgca
ttcggcctcgacggcgaggtgctgctctcgacattcatggaccgcgccggcgaacggatc
ggcgccacgctcgatctgcgcggcgatgagggcgtgatcgtcggccgcgcgccggagccg
gtggtctga
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