Rhodopseudomonas palustris BisB5: RPD_3485
Help
Entry
RPD_3485 CDS
T00345
Name
(GenBank) Glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00500
Starch and sucrose metabolism
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
Module
rpd_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RPD_3485
Enzymes [BR:
rpd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RPD_3485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
ABE40708
UniProt:
Q133N1
LinkDB
All DBs
Position
3872696..3874774
Genome browser
AA seq
692 aa
AA seq
DB search
MRLTAGTSSRLGATWDGRGTNFALFSANAHKVELCLFDAQGRRELERIELPERTEEVWHG
YLNDVSPGQLYGYRVHGPYDPERGHRFNAHKLLLDPYAKRLFGRLVWSDAHFAYRPGSPR
EDLSFDRRDNARGMPKAVVVDETGGFSRYESRPGIPWEDTIIYEAHVKGLTQLHQDVPPG
LRGTFGGLASPTMIDHFKRLGVTAIELLPVQALIDDRILVENKLVNYWGYNTISFFAPEP
RYAPDNPLDAFRTTVARLHDAGIEVILDVVYNHTAEGNHLGPTLSFRGIDNASYYWLMPD
NPRYYDDFTGCGSSVNLSHPRVLQMVMDSLRYWVEVCHVDGFRFDLATTLARGPNGFERN
SGFFTAIRQDPVLASVKLIAEPWDLGMGGYQVGAFPSQWSEWNDRYRSAMRRYWSGEGSL
IGEVSRRMTGSSDIFNHDGRMPRASINHVTVHDGFTLADLFSYNEKHNLANGEDNRDGSN
DNHSNNCGHEGPTDDPEIVALRRQLRKNQLACLFLAQGVPLMLAGDEVGNSQNGNNNAYC
QDNEIGWVKWDGLNREGDDLVDFIGLMTDVRSRFPQLRTRRWLDGRRADGSYGVLWLTPS
AAEMTEQDWAFPDGRFLAYVLSPSEPSADAIFIVLNSGVETIPFHLPRLPEYQIWHQLFD
TSRDTVQVAPLPSGSQTSAPPRSVMAFSGEGV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcactgccggaacttcctcccgactcggggccacctgggacgggcgcggaact
aattttgcattgttctcagccaatgcgcacaaggtcgaactctgcctgttcgacgcccaa
ggccgccgcgagctcgagcgcatcgaattaccagagcgaaccgaagaggtctggcacggt
tatctcaacgacgtctctcccggccagctctacggctatcgcgtgcacggcccatacgat
cccgaacgcggccaccggttcaacgcccacaagcttttgctcgatccctacgccaagcgg
ctgttcggtcggctggtatggagcgacgcgcatttcgcctatcgtcccggaagtccgcgc
gaggatttgtcgttcgaccgccgcgacaatgcgcgcggaatgccgaaggccgtggtggtc
gacgagactggcggattctcgcgctatgagagccggcccggcatcccgtgggaagacacc
atcatctacgaggcccatgtcaaaggcctgacgcagttgcaccaagacgtgccaccgggc
ctgcgcggcaccttcggcggcctcgcttcgccgacgatgatcgatcatttcaagcggctc
ggcgtcaccgcgattgaacttctcccggtccaagcgcttatcgatgaccgaattctggtc
gagaacaagctggtgaattactggggctacaatacgatctctttcttcgcgccggagccg
cgctacgcgccggacaatccgctcgacgcgttccgcaccacggtggcgcggctgcacgac
gccggcatcgaagtgatcctcgacgtggtctacaaccacaccgccgagggcaatcatctc
ggcccgacgctttcgttccgcggcatcgacaacgcctcgtattattggctgatgccggac
aatccccgctattacgacgacttcaccggctgcggcagctcggtcaatctcagccacccg
cgcgtcttgcagatggtgatggatagcttgcgctactgggtcgaggtctgccatgtcgac
ggcttccgcttcgacctcgccaccacgctggcgcgcggcccgaacggcttcgagcgcaac
tccgggtttttcacggcgatccgacaggatccggtgctcgcctcggtgaagctgatcgcc
gagccgtgggacctcggcatgggcggttaccaggtcggcgcttttccgtcgcaatggtcg
gagtggaacgaccgctatcgcagcgcgatgcggcgctattggagcggcgaaggcagcctg
atcggcgaagtgtcgcggcggatgacgggctcctccgacatcttcaatcatgacggccgg
atgccgcgcgcaagcatcaaccacgtcaccgtccatgacggcttcacgctggccgacctg
ttcagctacaacgagaaacacaacctcgccaatggcgaggataatcgcgacggctccaac
gacaatcacagcaataattgcggccatgaaggcccgaccgacgatccggagatcgttgca
ctgcgccgtcagctccgcaagaatcagctcgcctgtctgtttctcgcccagggcgttccg
ctgatgctcgccggcgacgaggtggggaattcgcagaacggcaacaacaacgcctactgc
caggacaacgagatcggatgggtcaaatgggacgggctcaatcgcgaaggtgacgacctg
gtcgacttcatcgggctgatgaccgacgtgcgcagccgctttccgcaattgcgcacgcgt
cgctggctggatggccgccgcgccgacggctcctacggcgtgctgtggctgacgccgtcc
gccgccgagatgaccgagcaggattgggcatttcccgacggccgtttcctcgcttacgtg
ctgagcccttccgagccttcggccgacgcgatcttcatcgtgctgaattctggcgtggag
acgatcccgtttcatctgccgagactgcccgaatatcagatctggcatcagttgttcgac
accagccgggacaccgtccaggtcgccccattgccatccggcagccagacctccgcgccg
ccgcgctcggtgatggcattctccggagagggcgtatga
DBGET
integrated database retrieval system
