Rhodopseudomonas palustris BisA53: RPE_2475
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Entry
RPE_2475 CDS
T00400
Name
(GenBank) conserved hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Pathway
rpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RPE_2475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpe03400
]
RPE_2475
Enzymes [BR:
rpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RPE_2475
DNA repair and recombination proteins [BR:
rpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RPE_2475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
AAA_22
HHH_4
PIF1
PhoH
AAA_16
NACHT
CheZ
Motif
Other DBs
NCBI-ProteinID:
ABJ06414
UniProt:
Q07NS0
LinkDB
All DBs
Position
complement(2722151..2724310)
Genome browser
AA seq
719 aa
AA seq
DB search
MIVVVERILSRRTFGTIFAGRDAQGALVRVKLNNGSAIGIPDVGETWSIDGSIEQSPWGP
QIKGIRAVRTLPSGRLMVEYLSASVAGIGPTRAGRLWAHFGEQLPEALDLGDVDAIAIVM
DPDRPALAPRLAAVLVSEWKRIAGEGRLIEWLAAAGIYDIRLAKRLFVLLGDQAPAKLGA
NPWCLVPFLPWRRVDRLALKLSIEAGHLSPERLERRFMGAADSVIKDVIAVGATAVSAPD
FRAMLARKLKLDALDLDHAIELALGRRAVVADADGTLRAPGCAMMEEAVSRRLKEMLRLA
PASFASATILEGLSDEQASAVRKILATGFACIRGRAGVGKTHVTKAICDVWDAAGGNLIL
AAVAGKAALRLSHATGRLARTLHRTIGELDERARILQEMDDSPGSDRRSRLESRLRELVV
ANERTLAIVDEASMLDLANLYKLLDRLPAGAKMVLIGDECQLPPVSFGLTFHRLARDASV
TATLSRIHRQAKQSEIPKVASAIRRRETPELATYDGEHQGVFLVHAQLREAIAENVTKVF
GQLSRQTDTMIVTPVNETVVGVAGLNRRLHDAYVERTSLQELRGPLGDLFSAGEPVVHRR
NDYHRGLWNGSTGTVFRIDRDRRSLTAIFDDREHVFASDDLVDISLGYALTCHRSQGSEA
TNVIVALPPSRLLDPSWLYTALTRAKTLAVIVGQHETIENALRRPYADESRLVGLRWPN
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtagtggtcgaacgcattcttagccgtcggacctttggcacgatcttcgccggc
cgcgatgcgcaaggcgcgctcgtccgcgtgaaattgaacaatggctcggccatcggaatt
ccagacgtcggcgaaacctggtccatcgacggctctattgaacagtccccttggggtccg
cagataaaaggcatccgggccgtacggaccttgccgagcggccgtctgatggttgagtac
ctctcggcatccgtcgcgggcatcggcccgacgcgcgcgggccgcctatgggcgcatttc
ggcgagcaactgcccgaagcgctagacttgggcgacgtcgatgccattgccatcgtcatg
gatcccgaccgcccagctctggcccctcgccttgccgccgtgctcgtgtccgagtggaag
aggatcgccggcgaaggccgtttgatcgagtggctagctgcggctgggatctacgacatc
aggctggcgaagcgcctctttgtcctcttgggcgaccaggcaccggcgaagctcggggca
aacccgtggtgccttgtaccatttcttccatggcgccgcgtcgaccggcttgccctcaag
ctttcgatagaggccggccatctgtctcccgaacgtctcgaacgccgcttcatgggggct
gcggattccgtcattaaagatgtgattgccgtaggcgccactgcggtctctgcgccggac
ttccgtgcgatgctcgccaggaagctcaaactcgacgcccttgatttagaccacgccatc
gaactcgctcttggtcgacgcgccgtagtagccgatgccgatggtaccctccgtgcacct
ggctgcgcgatgatggaagaggcggtctcgcgccgcttgaaggaaatgctgcgcctcgcg
ccggcttcgttcgcttctgcaacgatcctggaagggctctccgacgagcaggcctcggcc
gtcaggaagatccttgcgaccggttttgcgtgtatccgcggccgcgcgggggtaggtaag
actcacgtgaccaaggcgatctgtgacgtctgggatgcggctggcggcaatctcattctc
gctgccgtggccggaaaggctgcactgcggctttcccacgcgacgggtcgactagcgcgg
accctccatcgcacgatcggcgagctcgacgagcgagcccggattctgcaagagatggac
gactcgccggggtccgatagacgatcgaggctagaatcacgtctgcgcgagcttgtcgta
gccaacgagcggactcttgcgatcgtcgacgaggcgtcgatgcttgatttggcgaacctt
tacaaactgctggatcgcctgcccgccggcgcaaaaatggttttgatcggggacgagtgc
cagctgcctcccgtctctttcgggttgacattccatcgcctggcgcgcgatgcgtccgtc
acggcgacactctcgaggatacatcgccaggcaaaacagtccgagattccaaaggtggcc
agcgcgatccgccgccgggagacgcccgagctcgcaacttacgatggcgaacatcagggc
gtctttctagttcacgcgcaattacgcgaagcaatagccgaaaacgtcacgaaggtgttc
ggccagctgtctcggcagactgacaccatgatcgttacgcccgtcaacgaaaccgttgtc
ggcgtggcaggtctcaaccggagacttcacgacgcttacgtcgagcgcactagccttcag
gagcttcggggcccgctcggtgatctcttctctgcgggtgagccggtcgtccaccgccgt
aacgactatcaccgaggcctctggaacggctcgacgggcacggtgttcaggatcgaccgg
gaccgtcgcagcctgaccgccatcttcgacgatcgagagcatgtcttcgcctccgacgac
ctcgtcgacatttcgctgggctacgccctaacctgccatcgcagccaaggcagcgaggcc
actaacgtgatcgtagctttgccaccatcccgacttttggatccttcctggctatatacg
gcgctcacacgcgcgaagacgcttgccgtcatcgtggggcagcatgaaaccatcgagaat
gcactgcgacgtccctacgccgatgaaagtcgtctcgtcggtctaagatggcccaactag
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