Rhizobium phaseoli: AMC79_CH03134
Help
Entry
AMC79_CH03134 CDS
T04590
Name
(GenBank) uracil-DNA glycosylase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMC79_CH03134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpha03400
]
AMC79_CH03134
Enzymes [BR:
rpha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AMC79_CH03134
DNA repair and recombination proteins [BR:
rpha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AMC79_CH03134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
DUF2026
Motif
Other DBs
NCBI-ProteinID:
ANL98903
LinkDB
All DBs
Position
complement(3174153..3175607)
Genome browser
AA seq
484 aa
AA seq
DB search
MRRVVLAGRGELGEWRDAARALAAAGIVPDEIDWREKSAEADLSFQRDAMPPAPAASRKP
MTVPPAFIELAETVLCHCDPARFALLYRLLWRLQLDRQLLEVTSDEDVVRARLMAKNVHR
DAHKMTAFVRFKEVGAVSAGRRKFIAWFEPDHHIIRRTAPFFQRRFTDMDWLIATPKGSA
AWDGERLTFSDETCEKLNLTDVTDELWRTYYASIFNPARVKLKAMQAEMPKKYWKNLPEA
DLIPGLIASAENKVREMAAREATQSLPFHDRLQQASHNRTREPEAPAGTLETLRAEAAIC
TRCPLHANATQTVFGEGPRDAAVMFVGEQPGDQEDIAGRPFVGPAGRLFDQVMAEAGIDR
SMVYVTNSVKHFKYEPRGKRRIHQKPTMGEVKHCRWWLDLELALVEPKLIVAMGATALAA
LTGAKGRLQDVRGKAMAIEGGRTLFVTVHPSYLLRIPDERLKAEEMARFRQDILEIQGLM
TSAG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgggtcgtgcttgcaggacgcggtgagcttggcgaatggcgtgatgccgcacgc
gccttggcggccgccggcatcgtgcctgacgagatcgactggcgcgagaaaagcgcggag
gccgatctttcctttcagcgcgacgccatgccgccggcgccggcggcatcacgcaagccg
atgacggtgccgccagccttcatcgagcttgccgagacggtgctctgtcattgcgacccg
gcgcggtttgcgctgctttaccgcctgctctggcggctgcagctggaccggcagctgctc
gaggtgacctccgacgaggatgtcgtgcgtgcccggctgatggcgaaaaacgtgcatcgt
gacgcgcacaagatgacggccttcgtccgcttcaaggaggtcggcgcggtttccgcgggg
cgacgaaaattcatcgcctggttcgagcccgaccaccacatcatcaggcgcacggcaccc
ttcttccagcggcgtttcaccgacatggactggttgatcgccacacccaaggggtcggcc
gcctgggacggcgagcggctgacgttcagcgacgaaacctgcgagaagctcaatcttacc
gatgtaacagacgagctctggcgcacctattacgccagcatcttcaatccggcgcgggtg
aagctgaaggcaatgcaggcggaaatgccgaaaaaatactggaagaacctgccggaagcc
gatctcattcccggcttgatcgcatcggccgaaaacaaggtgcgggagatggccgcaagg
gaggcaacgcaatcgctgccctttcacgaccggctgcagcaggcttcacacaaccgtacg
agagaacccgaagcgccggccggcacgctggaaaccctgcgcgccgaggctgccatctgc
acccgttgtccgcttcacgccaacgccactcaaaccgtgttcggcgaggggccgcgcgat
gcggcggtgatgttcgtcggcgagcagccgggcgatcaggaggatattgcaggacgcccc
ttcgtcggcccggccggccggcttttcgatcaggtcatggcggaggcgggcatcgaccgt
tcgatggtctacgtcaccaactcagtcaagcatttcaaatacgagccgcgcggcaagcgg
cgcatccaccagaagcccactatgggcgaagtgaagcattgccgctggtggctcgatctg
gagttggcgctcgtcgagccgaagctgattgtcgccatgggggcgacggcgcttgcggcg
ctgaccggtgcgaaagggcgcctgcaggacgtcagaggcaaggcaatggcaatcgaagga
gggcgcacgctcttcgtgacggtgcatccatcctatctgctgcgcattcccgacgagcgg
ttgaaggcggaggagatggcgcgctttcgtcaggatatattggaaattcaggggcttatg
acgtcagccggataa
DBGET
integrated database retrieval system
