Rhizobium phaseoli: AMC79_PD00280
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Entry
AMC79_PD00280 CDS
T04590
Name
(GenBank) cadherin-like/VCBS repeat-containing protein
Organism
rpha
Rhizobium phaseoli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4082
DMFA2_C
He_PIG
Cadherin_4
Big_9
Mo-co_dimer
Motif
Other DBs
NCBI-ProteinID:
ANM01449
LinkDB
All DBs
Position
pRphaN261d:complement(287976..294308)
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AA seq
2110 aa
AA seq
DB search
MNRNARRWTSRSLLVDSLFPRWFAAGDTARPRKPVERHADSAQLAVSAQTADGKKLDGKL
ADDPNNNQAFAERDAEHRTGVIADPDVQDSITRPLPPLFDPFAADRETGDREGDTVASRL
FGYAPGFVGFNGHANGVAFGSHSPLYRSDAGMSPIGGDPLASYLPQGSAPTASGQASAAV
TAERTNSGKVVILESAPSAQSGGQHAGANALAFGMPFGVCGCGYYTSPTRILDWAHGGAL
LQQDGQLPGTRFTDGPDYVSTAKKAIGASVSDPLVDRDVSSFAGWRGTADWINSATSNGS
LPGGGEMGTGTGTKGKAVLSGSVTKPPQPSAQRSLATQDLAAAAAVASNAIVLENQKQGN
PESEWGIDTASTNIEGFATDISVDNGSTINFKINTNSTNYRIDIYRLGYYGGMGARKVTT
IQHTGLQTQPNPLRNATTGTVDAGNWAVSASWAVPSDAVSGVYIAKLVRQDGTFGENQIP
FIVRDDASHSDVVFQTSDETWQAYNGWGGANFYGGNGPATGQGAGRAYALSYNRPIATRD
GVGTYAGPQDYLFGAEYAGIYWLEQNGYDVSYLSGVDADRYGSLLLNHKTYIDAGHDEYW
SGQQRTNVEAARDAGVNLMFWSGNEVYWRTRWGNAYSADGTPYRTLISYKETWANSSIDP
SNEWTGTFRDPRFSPPAIGGGNPENSLTGQLFKVDDVGGNLGAITVGSDDANLRFWRNTS
VANLQPGQTATLTKNYLGYEWDEAPDNGFDPAGLVKLSSTTLPVTTYLLDYGNTTGSANA
THNLTLYRAPSGALVFGAGTVYWTWGLSDNHDNEATPTDPRVQQAMVNLLADMGIQPGTL
QSGLTAATASSDHTAPTSVITVPGTVAANTTVTISGTAADTGGGVIASVEVSTDNGASWH
PATGDENWTYSWTPAIAGTYTIRSRAVDDSINLETPSAGRTVTVTGPTFTSLFGGATPAV
VNTDDTAAVELGVKFQSSAAGTVSGIRFYKSSLDTGTHTGSLWSSTGTRLATLTFTNETA
SGWQSATFTSPVTLTPGQTYTASYHTNVGNYSTTANYFLSNVTSGPLTAPASGNGVYNYG
NSAFPTNSFDQTNYWVDVMFNPTNTNNTTPTAVADAGDATEKGGVANGSGGAAASGNVLT
NDTDPDAGDTKTVTAIKFGATSGTLGSALAGTYGSLVLNASGAYTYTINESNTAVQGLRQ
SSNTLSEVFSYTMRDTAGATATANLTVTIHGANDAPVLAVQTTTQNATVGSAFSFTLPTT
TFSDVDSGETLTYSATAADGTALPSWLSFNASTRTFSGTPTTGGTYGVKVTATDLGGLAA
NETFNIAVSVPGNTTPTAVADTGDATEKGGVANGSGGAAASGNVLTNDTDPDSGDTKTVT
AVNFGVTSGTLGSALNGTYGSLVLNASGAYTYTINESNTAVQALRQSTNTLSDVFSYTMR
DSAGATATANLTVTIHGANDAPVLAVQTATQNATLGSAFSFTVPTTTFSDVDSGETLTYA
ATAADGTALPAWLSFNASTRTFSGTPTAAGNYGVKVTATDLGGLSANETFNIAATTGPST
YSLFSASSTPAQTNLNDGQQLELGVKFTSSIGGTITGIRFYRSANDNGQNVVDLWSSTGT
KLATATFTNTTASGWQTANFTTPYTITANTTYVASYHTTGAYVATANFFTTAVTSGPLTA
PASGNGVYRYGGSATAGIFPNATFGATNYWADVVFNPTNTNNTTPTAVADAGDATEKGGV
ANGSGGAVASGNVLTNDTDPDAGDTKTVTAIKFGATSGTLGSALAGTYGSLVLNASGTYS
YTINETNTAVQALRLSTNTLSDVFSYTMRDTAGATATANLTVTIHGANDAPVLAVQTATQ
NATLGSAFSFTLPSTTFSDVDSGETLTYSATAADGTALPSWLSFNASTRTFSGTPTTAGN
YGVKVTATDIGGLSANETFTITAGSAPSTYSLFSASSTPTQTNLNDGQQLELGVKFTSSA
AGDITGIRFYRSANDNGQNVVDLWSSTGTKLATATFTNTTASGWQTANFTTPYTITANTT
YVASYHTTGAYVASANFYTTAVTSGPLTAPASGNGLYAYGGSATTGLFPTSTFNSTNYYA
DVVFRPQLAA
NT seq
6333 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcaacgctcgtcggtggacttcgcgctcactcctggtggattcgctatttcct
cggtggtttgcagccggtgacacggcaaggccacgcaagcctgtcgaaaggcacgcggac
agtgctcaacttgcggtgtccgcgcaaactgcggatggaaagaagcttgatggcaaactt
gccgacgatcccaacaataaccaggcgttcgccgagcgcgatgcggagcatcggacaggc
gtgatcgccgaccctgacgttcaggacagtatcacccgtccactgccgcccttgttcgac
cctttcgcagcagatcgggagacaggggaccgggaaggtgacacggttgcgtctcggttg
tttggctatgcgccaggctttgtgggattcaacgggcacgcgaacggggttgcattcgga
tctcattcgccgctttatcgcagcgacgctggaatgagccctatcggcggcgatcctctg
gcttcgtacctgccgcaaggctccgcaccgacagcttctgggcaagcttccgctgcggtg
acggctgagcgtacgaactcgggcaaggtcgtcattctcgaatcggcgccatcagcgcag
tcgggcgggcagcatgccggagcgaatgcgctggcgtttggtatgcccttcggcgtgtgc
gggtgcggctactatacgtcccccacgcggattctcgattgggcccatggcggcgccctg
cttcagcaggatggtcagttgccggggaccagatttaccgacgggccggattatgtgtcg
acggccaagaaggccatcggcgcctcggtcagcgatccgcttgtcgatcgtgacgtatcc
tcgttcgcgggctggcgcggaaccgcagactggataaactcggcgacctcgaacggatca
ctgcccggcggcggagagatggggacgggaaccggcaccaagggtaaagctgtcctttcc
ggctcggtgacgaagccacctcaaccttctgcgcagcggtcgttggcaacgcaagatctg
gccgccgccgcagcggtggcgagcaacgcgatcgtgctggaaaaccagaagcagggcaat
ccggagagcgagtggggcatcgacactgccagcactaacatcgaagggtttgcgaccgac
atcagcgtcgacaacggcagcacgatcaacttcaagatcaataccaattccaccaactat
cgtatcgatatctatcggctcggctattatggcggcatgggcgcccgcaaggtcacgacc
atacagcataccggattgcagacgcagcccaatccgctgcgcaatgccacaacaggcact
gtggacgccggcaactgggccgtctcggcgtcttgggccgtccctagcgatgccgtctcg
ggcgtctatatcgccaagctcgtgcgtcaggacggcaccttcggcgaaaatcagatcccg
ttcatcgtgcgcgacgacgccagccacagcgacgtcgtcttccagacctctgacgagacc
tggcaagcttacaacggctggggtggcgcaaacttctacggcggcaacggcccggcgacg
gggcagggggcgggccgcgcctatgcgctcagctacaacaggccgattgcgacccgcgac
ggggtcggcacctatgccggtccgcaggactatctgttcggggccgaatatgcaggcatc
tactggctggaacagaacggttatgacgtatcctatctgtcgggcgtcgacgccgaccgc
tatggcagcctgttgctcaatcataagacctatatcgatgcggggcacgacgaatactgg
tccggtcaacagcgaaccaatgtcgaagccgcgcgcgatgccggcgtcaacctcatgttc
tggagcggcaacgaggtctattggcgcacccgttggggcaatgcttacagtgcggacggc
acgccctatcgcactctcatctcctacaaggagacatgggccaacagcagtatcgatcct
tccaacgaatggaccggcactttccgtgatccgcgtttcagtccacccgctatcgggggc
ggaaacccagagaactcgttgactggccaattgttcaaggtcgacgacgtcggcggcaat
cttggcgcgatcacggtcggctctgatgatgccaacctgcgcttctggcgcaatacgagc
gtcgcaaaccttcagcccggccagacggcaacgctcaccaagaattatctcggttacgag
tgggatgaagcgcctgacaatggcttcgatccggccgggctcgtgaagctgtcgtcgacg
acgctgccggtcaccacctatttgctcgactacggaaacacgacgggcagtgcgaacgcg
acccacaatctgacgctctatcgcgcccccagcggtgcgctggtgttcggcgctggtacg
gtctattggacatggggcctgagcgacaatcacgataacgaggcgactcccaccgatcct
cgcgtgcagcaggcaatggtcaatctgcttgccgatatgggcattcagccaggcacgctg
caatccgggcttaccgccgcgactgcttcatcggaccatactgcgccgacctccgtcatc
acggtacccggcacggtggccgctaatacgacggtgacgatttcaggcaccgctgccgat
acgggcggcggggtcatcgccagcgtcgaggtttcgactgacaacggtgcgagctggcat
ccggcgacgggcgacgagaactggacctattcttggacgccggcaattgcaggcacctat
acgatccgatcgcgggcggtggacgacagcatcaacctcgagacaccctcggcggggcgc
actgtcaccgtcactggaccgacttttacatcgctcttcggcggcgcgacgccggcggtc
gtcaacacagacgatactgcagccgtcgagcttggggtcaaattccagtcctccgcggcg
ggcacagtcagcggtatcaggttctacaagagcagcctggatacgggcacacataccggg
tcgctctggtcaagcacgggtacgcggctcgcgaccctcaccttcaccaacgagaccgcc
agcggctggcagtctgctactttcacaagcccggtgacgttgacgcccggacagacctat
acggcatcttaccacacgaatgtcggcaactattcgacgaccgccaactacttcctctcc
aatgtgacgagtggcccgctgacggcgccggcgagcggaaacggcgtctataactatggc
aacagcgcgttcccgacgaacagcttcgaccagacgaactactgggtcgatgtgatgttc
aaccccacgaatacgaacaacaccacaccgacggcggttgccgatgcgggggatgccacg
gagaagggcggcgtggccaatggttcgggcggtgcggctgccagcggcaacgtactgacc
aacgataccgatccggatgccggcgacaccaagacggtaaccgccatcaagttcggtgcg
acgtcgggcacgctcggctcggcgctcgccggcacttatggcagcctcgtgctcaatgcg
tcgggtgcctatacctatacgatcaacgagagcaataccgccgtccaggggctgcgccaa
tcgtccaacacgctgagcgaagtcttcagctacacgatgcgagacactgccggtgccacg
gccacggcaaacctgaccgtcaccatccatggcgccaacgatgcgccggtgctggctgtc
cagacgacgacccagaacgccacggtcggctccgccttttccttcaccctgccgacgacg
actttcagcgatgtcgacagcggcgagacgctgacctattcggccaccgccgccgatggc
acggcattgccctcctggctgagcttcaacgcctcgacgcggaccttctccggcacgccg
acgacaggcggcacttacggcgtcaaggtgacggcgaccgaccttggcggccttgccgcc
aacgagaccttcaacatcgccgtgtcggtgcccggcaatacgacgccgacggcggttgcc
gatacaggagacgcgaccgaaaagggtggggtggccaatgggtcgggcggcgcggctgcc
agcggcaacgtgctgaccaacgacaccgatccggattccggtgacaccaagacagtgacg
gcggtcaatttcggcgtgacgtcgggcacgctcggctcggcattgaacggcacctatggc
agcctcgtgctcaatgcgtcgggtgcctatacctatacgatcaacgagagcaataccgcc
gtccaggcgctgcgccagtcaaccaacacgctgagcgatgtcttcagctacacgatgcgc
gacagcgccggcgcgacggccacggcgaacctgaccgtcaccatccatggcgctaacgac
gcgccggtgctggccgtccagaccgcgacccagaacgccaccctcggctccgccttctcc
ttcacggtgccgacgacgaccttcagcgatgtcgacagcggcgagacgctgacctacgcg
gcaacggccgccgatggcaccgcacttcccgcctggctctccttcaacgcctcgacgcgc
accttctccggtacgccgacggcagccggcaactacggcgtcaaggtgacggcaaccgat
ctcggcggcctctcggccaacgagaccttcaatatcgctgccacgaccgggccatcgacc
tacagcctgttttccgcctccagcacgccggcccagacgaacctcaatgacggccagcaa
ctcgaactcggcgtcaagttcacctcgagcattggcggaaccattaccggcatcaggttc
taccgcagcgccaacgacaacggccagaacgtcgtcgacctctggagctccaccggcacc
aagctcgctactgccaccttcaccaacaccacggcgagcggctggcagacggcgaacttc
acgacgccctacaccattaccgccaacacaacctatgtggcgtcgtatcacacgaccggc
gcctatgtggcgaccgccaatttctttacgactgccgtcaccagcggcccgctgacggcg
ccagccagcggcaatggcgtctatcgctatggcggttctgccaccgccggcattttcccg
aatgctacttttggcgccaccaattactgggccgacgtggtcttcaaccccacgaatacg
aacaacaccacaccgacggcggttgccgatgcgggggatgcgaccgagaagggcggggtg
gccaatggttcgggtggtgcggttgcgagcggcaacgtgctgaccaacgacaccgatccg
gatgccggcgacaccaagacggtaaccgccatcaagttcggtgcgacgtcgggcacgctc
ggctcggcgctcgccggcacttatggcagcctcgtgctcaatgcatcgggtacttacagc
tatacgatcaacgaaaccaataccgccgtccaggcgctgcgcctgtcgaccaacacgctg
agcgatgtcttcagctacacgatgcgcgacaccgccggcgccaccgccacggcaaacctg
accgtcaccatccatggcgccaatgacgcgccggtgctcgccgtccagaccgcgacccag
aatgccaccctcggctcggccttctcctttaccctgccgtcgacgaccttcagcgatgtc
gacagcggcgagacgctgacctattcggcgacggccgccgatggcacggcattgccctcc
tggctgagcttcaacgcctcgacccgcaccttctccggcacaccgacgacggcaggcaac
tacggcgtcaaggtgacggcaaccgatatcggcggcctctcggccaacgagactttcact
atcactgccgggtcggcgccatcgacctacagcctcttttcagcctccagcacgccgacc
cagacgaacctcaatgacgggcagcaactcgaactcggcgtcaagttcacctcgagcgcc
gccggcgacattaccggcatcaggttctaccgcagcgccaacgacaacggccagaacgtc
gtcgacctctggagctccaccggcaccaagctcgctactgccaccttcaccaacaccacg
gcgagcggctggcagacggcgaacttcacgacgccctacaccattaccgccaacacaacc
tatgtcgcctcctaccacacgacaggcgcctatgtggcgagcgccaatttctatacgacc
gccgtcaccagcggccccctgacggcgccagcgagcggcaacggcctctatgcctatggc
ggctccgccaccacaggtctcttcccgaccagcaccttcaattcaacgaattattacgcc
gatgtggtcttcaggccgcagcttgccgcatga
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