Ruditapes philippinarum (Manila clam): 132730147
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Entry
132730147 CDS
T09557
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
Organism
rphi
Ruditapes philippinarum (Manila clam)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans_2
Ion_trans
PocR
Motif
Other DBs
NCBI-GeneID:
132730147
NCBI-ProteinID:
XP_060571984
LinkDB
All DBs
Position
Unknown
AA seq
1281 aa
AA seq
DB search
MTKKEKRKKLQPEKTDLEVKDVEKETPKTEGKSKSRSRSRGRRSLSAIFRKSSSRTESND
RSNLLINEEAGQESASDINPRINPRDYLKRMTVREALVYDRHRGRSPSRRTRKLEKKILH
NEARLSNDNLSVSLPHLDHLSEDQSHEPAASFVSYDARGGSTLPRIKKRRGHSDGRDAQQ
SDFQSSNISNISKPVQILPLDKRKYLINKDIYIDETNIPQNINLGVTNDTHSNKNDNRIP
DELSENEKRRLETHNMFLSLRDNKSAHTHSHLALEQVSDDFIDGKPDTTALTILHTTSAN
SNVEMSDKLNKKRTVESCQVDNNHTYQNDISRECGSPKNVNADCADIEAPVFETQANKTE
KKRRSSYISPRRFSRTSRASVTSNISDSSNRSLPADYKPQYSTEPQKAQVKYQRHFSKEN
KKDKQIIEDRNEKQNHHQQMIDASTSMDRLSLFAETDNHQNHNIKLKKIVPDVIYEPEDT
TIEAQIDKNMCQSLAHENEILKNNSSALECIEDKCENLNKVQSLQREIIVIDTNVEQNIQ
THDHESAFRPIRSDTDLYVQDTTNSDSNKGNKCHHIGFDIGEIEVLSSDIVIENEKHVDS
SFIINHKAKKDVKKSKDESEDIKKVTEKDTEKTEKDSRKSWSGKSKKEKRKSKKKLEKEK
HRKESGSSSKTIECVENENVPTHGDLDKTIKDDGKSKCSKSKKRKSILKRRSKENKSLKD
SIKPITRTASLSQFVDECEGKERRKSVSICEKRSRSMDDLTKGIEILDKDKAIVKHNVSK
KTDKPAETKCSNNTDLKDVKPPRLSIAAIVAIRAKISRMKRARQEHARNNACNGNNDSES
KVEDSTPHNDHHESNENTDMSVAKVFYENEINTSLGKSDNSISLIEDADKEVKDLVYDKR
ISFSPYCDDTISEEEMIKQRQRNTRLTSRRESKVRQRQKKVINCCKKGIAFLFSHIGLCS
LVVGYCILGGIIFKALEGDNEIEQKKEIKELRQNFTEKIYRLAFEQTLTKGNRDIFMNEV
NLILKNFSVMIHKQTKEAGWDGKEVKMTMNTDGEESMEPEPEQWSYPSSLLYAITVMTTI
GYGHVAPKTDEGRIMTIAYAVLGIPLTLLCLTNIGDLMAHGFRSLYGKVCCGLCCILFRP
RRRRRMDPEKGLSGAEERMIMQENEKSGEVVHVPTSVCLLLMSSYIMLGTLLFAEWENWD
MVTGTYFCFITLSTIGFGDVVPGMNQTDWDQQEKLVSCALYLVFGLSLIAMCFNLVQEDV
KAKCKWLGMKLGIIDKPVSSV
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaaggaaaaacgcaagaaacttcaaccagaaaagacagacctagaagtgaag
gatgttgaaaaagaaacacccaaaacggaaggaaaaagtaagagtaggagtcgatcacga
ggaaggcgttcattgtcggctattttccgcaagtctagttcaagaacagaaagtaacgat
aggtctaatcttcttataaatgaggaagcgggccaggaatctgcatctgatataaatcca
cggattaatccaagggattatttaaaaagaatgacagttcgtgaagcattagtatatgac
cgccatcgaggaagatccccgagtcgtagaactagaaagttagaaaagaaaattttacat
aatgaggcccgattatcaaatgacaatctctctgtgtctcttccacatcttgatcattta
tctgaggaccaatcgcatgaaccagcagcatcatttgtgtcttatgatgccagaggcggg
tcaactcttccgcgtattaagaaaagacgtggccattcagatggtagggatgctcaacaa
agtgattttcaaagctcaaacatttccaatataagtaaacctgttcaaattctcccttta
gataaacgaaaataccttattaacaaagatatatatattgatgaaacaaatattcctcaa
aacattaatcttggtgtaacaaacgatacgcattccaataaaaacgataatcgaattccc
gatgaattatccgaaaatgaaaaaagaagactggaaacgcataatatgtttttatctctt
cgggataacaaatcagcacatacacattcacatttagccttagaacaagtcagtgatgat
ttcatagatgggaaaccggatacaacggcattgactatattgcacactacttctgcaaat
tcaaatgttgaaatgtcggacaaattaaacaaaaaaagaacagtagaaagttgtcaggtt
gataacaatcatacttaccagaatgacatttcacgcgagtgtggttcgcccaaaaacgtt
aatgcggattgtgcggatattgaagcacctgtttttgaaacacaagcaaataagactgaa
aagaaaagacggtcatcatatatttcaccacgacgattcagcagaacatcaagagcaagt
gtgacttcaaacatatccgactcgagtaatcgctcattacccgctgattataagccacaa
tattcaactgaaccccaaaaggcgcaagtaaaataccaaagacattttagcaaagaaaat
aaaaaagataaacaaattattgaagatagaaatgaaaagcaaaatcatcatcagcaaatg
atagatgcaagcacaagtatggataggctttctttatttgctgagacagataaccatcaa
aaccacaatataaaattaaagaaaatagtgcctgacgtgatttatgaaccagaagatacc
acgattgaagcccaaatagataaaaatatgtgccaaagtttggcacacgagaatgaaata
ctgaaaaataatagctccgctttagaatgtattgaagataaatgtgaaaatttgaataaa
gtgcagtcacttcagcgtgaaataattgtaatcgacacaaatgtcgaacaaaatattcaa
acccatgaccatgaaagtgcatttagacctattagatctgacactgacttatatgtacag
gatacaacaaacagcgatagtaacaaaggtaataaatgtcatcatattggatttgatata
ggcgaaattgaggtattatcatccgatattgtaattgaaaatgaaaaacatgttgacagt
agcttcataataaatcataaagcaaagaaagacgtcaagaaatcaaaagatgaatcagag
gatataaagaaagttacggagaaggatactgagaaaactgagaaagactccagaaagtct
tggtcaggtaaaagtaaaaaggaaaaaagaaaatctaaaaagaaattagaaaaggaaaaa
cataggaaagaaagcgggagtagcagcaaaacaattgaatgtgtggaaaatgaaaacgtt
ccaacacatggagatttagataaaacgattaaagatgacgggaaatcaaaatgttctaaa
agtaaaaaaagaaaaagtattctcaaaagacgttcaaaagaaaacaaatctttaaaagat
agtattaaacccattactcggacagcatcattaagtcagtttgttgacgagtgtgaagga
aaggaaagacggaaaagcgtttcaatatgtgaaaaacgatctagatccatggatgattta
actaaaggcatagaaattttagataaagacaaggcaattgttaaacataatgtttcaaag
aaaactgataaacccgctgaaaccaaatgcagcaataacaccgacttaaaagacgttaaa
ccaccgagactttctatagctgcaatagttgcaattagagctaaaatatctcgtatgaaa
agagcaagacaggaacatgctagaaacaatgcgtgcaatggtaacaatgattctgaatct
aaagtagaagatagtactccccacaatgatcaccatgaatctaatgaaaatacagatatg
agcgtagcaaaagtgttttatgaaaatgagattaatacaagtcttggtaaatcagacaat
tctatttctctcatcgaagatgctgacaaagaagttaaagatcttgtttatgataagagg
attagtttttcaccatactgtgatgatacaatatctgaggaggagatgataaaacaacgt
caaagaaatacaaggttaacttctagacgcgaaagtaaggtcagacagcgtcaaaagaaa
gtaataaattgttgtaagaaaggcattgccttccttttttcacatataggattatgctct
ctggttgtcggttactgtattttaggaggaatcatttttaaggcattagaaggagataac
gaaattgaacaaaagaaagaaataaaggagttaagacaaaattttacagaaaaaatctat
aggcttgcctttgagcaaacattgactaaaggtaatcgagacatctttatgaatgaagtt
aacttgatattaaagaacttttcagtgatgatacacaaacaaacaaaagaagcaggatgg
gacggtaaggaggttaaaatgacgatgaatactgacggcgaagaatcaatggagcctgaa
cccgagcaatggtcatatcctagttcccttttatacgccataactgttatgaccacgata
gggtacggtcatgtggctccaaagacagatgaaggtcgaataatgacaatagcatatgca
gtattaggaatcccgttaacactgttgtgccttactaacattggtgacctcatggcacat
ggatttagatcgctttacggcaaagtgtgttgtggtctgtgttgcatattattccgccct
cgaagacgacgccgaatggatcctgagaaaggactttccggggctgaagagcgcatgata
atgcaagaaaatgaaaaatcaggggaagtagttcatgtacctacctccgtgtgtttatta
cttatgtcttcatacatcatgctaggaactttattgtttgcggagtgggaaaattgggat
atggtaacagggacttatttctgtttcatcactctgagcactattggttttggagatgtc
gtaccaggaatgaaccaaacagactgggatcaacaagagaaactagtgtcatgtgcctta
tatcttgtgtttggcttatcattaattgcgatgtgtttcaatttagtgcaagaagacgtg
aaagctaaatgtaaatggcttgggatgaaactaggaataattgataagccagttagttca
gtttga
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