Ruditapes philippinarum (Manila clam): 132742761
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Entry
132742761 CDS
T09557
Name
(RefSeq) protein bicaudal D-like isoform X1
KO
K18739
protein bicaudal D
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132742761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132742761
04131 Membrane trafficking [BR:
rphi04131
]
132742761
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
132742761
Membrane trafficking [BR:
rphi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
132742761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BicD
KxDL
Motif
Other DBs
NCBI-GeneID:
132742761
NCBI-ProteinID:
XP_060587206
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MSKPDASSNSVEELQIELARLQQELTETNQEKIRAAEYGLAVLEEKHQLESHIEELEAER
DQIKTELEHAKETLSTHQGIFKKQNESGINLEDSIIRESVSREQGFQENIQGLETELKTC
KQNHERLSSEHTVMANLVSELQTKCDQLEDQRRQLKSELKEYKIRENRNIVDYSELEEEN
ISLQKQVSVLKQSQVEYEGLKHEKKRLEEELDDLNMQLDESVSLKKIVDKNLEEALNALQ
VEREQKHALKKELDARLTQESMFNLSNLAQLGGLSDGLRLNNHEGDVDEEDGHPALKRVE
ADYEHKDENQPARKGPGKVNDILSEIQQNEVKKLEQMLEQSEEEKIELQRALDEAKKLIE
DTQSDLIEQKDRANQLKTQISAALANGSLDSSPDSDMTDYLDEQIENESDQGKKALLEMK
KNLLMNEKKYSSALKQINDLQSEISNLMDKNKQGNLKEGDPAITEILNQLQAKVKQYEDV
VKDMNKDLKSMTKIAGESQGSLNMTQEEMLKVTEELAQLYHLVCEVSGETPSRVMLQHAK
AIDKLSKQDSREGAEDQGEKEEGGTEKESGKKKRSKSKKSRSESYEDSVKADANSCQKLT
ETILDQTKHLKKSVEHLMEVSRNRTDDNEQSDAQELQEQIVKLKAMLSTKREQIATLRSV
LKANKSTAEFALANLKQKYENEKVIVTETMLKLRNELKALKEDAATFASLRAMFAQRCDE
YVTQLDEYQRQLAAAEEEKKTLNSLLRMAIQQKLVLTQRLEDLEFDRERRNMRRPQGGGG
RNKSGASKVSHYNDEQSYSGRYGGGRHHNYQNHHSHSNPRRDY
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccggacgctagttcgaattccgttgaggagcttcaaatagaactcgctcgt
ttgcagcaggaactaacggagacaaaccaagaaaaaatccgagcggcagaatacggattg
gccgtccttgaggaaaaacatcaactcgagagccatatagaggagctagaagctgaaaga
gatcaaattaaaactgagttagaacatgctaaagagaccctcagtacacatcaagggatt
tttaaaaaacagaatgaaagtggaatcaatctcgaggacagtattatacgtgagtcagtg
tcgcgtgagcagggattccaggagaatattcagggtcttgaaactgagcttaaaacctgc
aaacagaatcatgagagactctcttctgagcacactgtcatggcaaacctggtttctgag
ctacagaccaaatgtgatcagctggaggaccagagaaggcagttaaagagtgaactgaaa
gagtataagataagagagaataggaacattgtggactattctgaattggaggaagaaaac
atatctctacaaaagcaagtgtctgtgttaaaacaaagtcaggttgaatatgaagggtta
aaacacgagaagaaaagattggaagaagagctagatgatttgaacatgcagttagatgaa
agtgtttctttgaaaaagattgttgataaaaatcttgaagaggcattgaatgcattgcaa
gttgaaagagagcagaagcatgccttaaagaaagaacttgatgctagactaacacaagaa
tctatgtttaatttgagtaatttagctcagcttggtggtctcagtgatggtttaagatta
aacaatcatgaaggtgatgtagatgaggaagatggacatcctgcactgaaaagagttgaa
gcagactatgaacacaaagatgaaaatcagcctgctagaaaaggccctggtaaagtcaat
gatattcttagtgaaattcaacaaaatgaagtgaaaaaattggaacaaatgcttgaacag
agtgaagaagaaaaaattgaattgcaaagggcattggatgaagcaaagaaattaattgaa
gatacacaatctgatcttattgaacaaaaagatagagcaaatcagttgaaaacacagata
agtgcagctttggcaaatggtagtcttgattcctcaccagacagtgatatgacagattat
ttagatgaacagattgaaaacgaatctgatcaaggaaagaaagccttgttagagatgaag
aaaaatttacttatgaatgaaaagaaatattcctctgcactaaagcaaatcaatgatctt
cagtctgaaataagtaatttgatggataaaaacaaacaaggaaatctaaaagaaggtgat
cctgccattactgaaattcttaaccagcttcaagctaaggtgaaacaatatgaggatgtt
gttaaagacatgaacaaagacttgaaatcaatgaccaagattgctggtgaatcacaaggc
tctttgaacatgacacaggaggaaatgttgaaagtaactgaggaacttgcccaactttat
catcttgtgtgtgaagtaagtggagaaacaccaagccgtgttatgcttcagcatgctaaa
gctattgacaaactgtccaaacaagactcaagggaaggagctgaagaccaaggggaaaaa
gaagaaggtggtactgaaaaggaaagtggtaaaaagaaaaggtccaaatctaaaaagagt
agatctgaaagttacgaggactctgtaaaagctgatgctaactcctgtcaaaaattaaca
gaaacaattcttgaccagacaaaacatctgaagaagtctgttgaacatctgatggaagtt
tctagaaatagaactgatgataatgaacagtcagatgctcaagaattacaggaacagatc
gtcaagctgaaggcaatgttgtcaactaagagagagcagattgcaacattaagaagtgtt
cttaaagccaataaatcaacagctgaatttgctttggcaaacttgaaacaaaagtatgaa
aatgaaaaagttatagtaacagaaacaatgttgaagctaagaaatgaactcaaagcatta
aaagaagatgctgccactttcgcttccttaagagctatgtttgcccaacgttgtgatgaa
tatgtcacccagcttgatgaataccaacgtcaacttgctgccgcagaagaagagaagaag
accctgaattccctcctacgaatggctatccagcagaaactcgtgttgacacagagacta
gaggatttggaattcgaccgagagagacggaacatgcgtagaccgcaaggaggcggcggt
agaaacaagtctggcgcttccaaagtaagtcactacaatgatgaacagtcatatagtggt
cgctatgggggaggcagacaccataactatcaaaatcatcatagccattcaaatccaaga
cgcgactattag
DBGET
integrated database retrieval system
