KEGG   Ralstonia pickettii 12J: Rpic_0447
Entry
Rpic_0447         CDS       T00762                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rpi  Ralstonia pickettii 12J
Brite
KEGG Orthology (KO) [BR:rpi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rpi02048]
    Rpic_0447
Enzymes [BR:rpi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Rpic_0447
Prokaryotic defense system [BR:rpi02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Rpic_0447
SSDB
Motif
Pfam: EcoR124_C SWI2_SNF2 ResIII HSDR_N DEAD SNF2-rel_dom PBP_GOBP
Other DBs
NCBI-ProteinID: ACD25602
UniProt: B2UGB5
LinkDB
Position
1:477646..480615
AA seq 989 aa
MTAENRVEQDLISKLCDLKYTYRPDIRDRAALEANFREKFEALNRVHLTDSEFQRLLDSV
ITSDVYNAAQTLRNINSFERDDGTPLNFTLVNIRDWCKNDFEVVNQLRINTDNSHHRYDV
MLLINGVPVVQIELKTLAVSPRRAMQQIVDYKSDPGNGYGKTLLCFIQLFIVSNRTDTWY
FANNNARHFSFNADERFLPVYQFASEDNKKITQLDSFAEKFLAKCTLGQMVSRYMVLVAS
EQKLLMMRPYQIYAVKAIVDCIHQNCGNGYIWHTTGSGKTLTSFKASTLLKDNPDIDKCL
FVVDRKDLDRQTREEFNRFQEGCVEENTNTETLVRRLLSDDYADKVIVTTIQKLGLALDG
TNKRNYKERLEPLRNQRMVFIFDECHRSQFGENHKAIKEFFPNAQLFGFTGTPIFEQNAS
YQQIEGQQASYRTTDDLFQRCLHQYTITHAIEDRNVLRFHVDYFKPEGKNPPKPGEGLAK
AKVIETILTKHDAATNERKFNAVLATASINDAIEYFEAFKILQAKRQDEDETFQQLNVAC
VFSPPAEGNKDVQQIQEDLPQEKEDNQQDPEGKKASLTRIIADYNARFGTNHRIGEFDLY
YQDVQKRIKDQQYPNADLPHAEKIDITIVVDMLLTGFDSKYLNTLYVDKNVKHHGLIQAF
SRTNRVLNDSKPYGNILDFRQQQKPVEDAITLFSGEKIDNPREIWLVDPAPKVIDSLQTA
TQKLADFMQSQGLANAPEDVANLKGDAARSQFVNLFKEVQRLKTQLDQYTDLSEEQKTQI
TQIASPDQLQGFKGVYLETAKRLKEQQDKQGDQALPEVQQLDFEFVLFASAVIDYDYIMA
LIARMTQQKPGKLTLNREQLIGLIQSDAKFIDEREDIAEYIRGLPVGQALDETAIRAGFE
RFKAEKKTRELTDIATKHGLAAEALQAFVDDVLRRRIFDGEALSELMAPLGLGWKARTQK
ELALVEDLTPLLHKLAQGREISGLSAYEQ
NT seq 2970 nt   +upstreamnt  +downstreamnt
atgacagccgaaaatcgggtagagcaagatcttatctccaagctctgcgacctaaaatat
acctatcggccagacattcgggaccgcgccgcactggaagcgaacttccgcgaaaagttc
gaggccctcaaccgggtacacctgaccgacagcgagttccaacgccttctggacagcgtg
atcacgtcggatgtctacaatgccgcccagacgctgcggaacatcaacagcttcgagcgc
gacgacggcacgccgctgaacttcacgctcgtcaacatccgcgactggtgcaagaacgac
ttcgaggtggtcaaccagttgcgcatcaacaccgacaacagccatcaccgttacgacgtg
atgctgctgatcaacggtgtgcctgtcgtgcagatcgaactgaagacactggccgtcagc
ccccgccgggctatgcagcagatcgtcgattacaagagcgaccccggcaatggctacggc
aagacgctgctctgttttatccagctcttcatcgtcagcaatcgcaccgacacctggtac
tttgccaacaacaacgcgcgccacttcagcttcaatgctgacgaacggttcctgcctgtc
taccagttcgcaagcgaggacaacaagaaaatcacgcaactggatagcttcgccgagaag
ttcctcgccaagtgcaccttgggccagatggtcagccgctacatggtgctggtagccagc
gagcagaagctgctcatgatgcggccgtaccaaatttatgccgtcaaggccatcgtggac
tgcatccatcagaattgcggcaacggctacatctggcacaccactggcagtggtaagaca
ctcacttcgttcaaagcatccaccttgctcaaggacaacccggacatcgacaaatgcctg
ttcgtggtggaccgcaaggatctggaccgccagacccgcgaggaattcaaccgtttccag
gaggggtgcgtcgaagagaacaccaacaccgaaacgctggtgcgccgtctgctatctgat
gactacgcagacaaggtcatcgtcaccaccatccagaagctgggtctcgctctggatggc
accaacaagcgcaactacaaagagcgcctggagccgttgcgcaaccagcgcatggtgttc
atcttcgacgaatgccaccgttcgcaattcggcgagaaccacaaggccatcaaggagttc
ttccccaacgcccagctatttggcttcactggaacgcccatcttcgagcaaaacgccagc
tatcaacagatcgaaggacaacaagccagttaccgcactacagacgatctgttccagcgt
tgcctgcaccagtacacgatcacccacgctatcgaagaccgcaacgttttgcgcttccac
gtggactacttcaagcctgagggtaagaacccgcccaagcctggcgaaggcttggccaag
gccaaggtcatcgagaccattctcaccaagcacgatgccgccaccaacgagcgcaaattc
aacgccgtgctggccaccgccagcatcaacgacgccatcgagtatttcgaggcattcaaa
atcctccaggccaaaaggcaggacgaagatgaaaccttccagcagctgaacgtagcttgc
gtgttctccccgcccgctgagggcaacaaggacgtgcagcaaattcaggaagacctgccg
caggaaaaggaagacaaccagcaggacccggagggcaagaaggcttcgctcactcgcatc
attgccgactacaacgcccgcttcggcaccaaccaccgcatcggtgagttcgacctgtac
taccaggacgtgcaaaagcgcatcaaggaccagcaataccccaacgcagatctgccccac
gccgagaagatcgacatcaccatcgtcgtggacatgctgctcacaggtttcgattccaag
tacctgaacaccctgtacgtggataaaaacgtcaagcaccacggcttgattcaggccttt
tcgcgcaccaatcgcgtgttgaacgacagcaagccctacggcaacattctcgacttccgc
caacagcagaagcctgtggaagatgccatcacactcttctctggcgagaagatcgacaac
ccgcgcgaaatctggctggtggacccagcccccaaggttatcgacagcctgcaaaccgcc
acccagaagctggccgatttcatgcaatcacagggtctggccaacgcccccgaagacgtg
gccaacctcaagggagacgctgcgcgcagccagttcgtcaacctgttcaaggaagtgcaa
cgcctcaagacccagctcgatcaatacaccgacctgagcgaggaacagaaaacgcagatc
acgcagatcgcgtcgcccgaccagttgcaaggcttcaaaggcgtgtacctggagaccgcc
aagcggctcaaggagcagcaagacaagcaaggtgaccaggctctccccgaggtgcagcag
ctcgatttcgagttcgtgctctttgcctccgctgtcatcgactacgactacatcatggcg
ctgatcgcccgtatgacgcagcagaagcccggcaagctgacgctgaaccgcgaacagctt
atcggcctgattcagtccgacgccaagttcatcgacgagcgcgaggacattgccgaatac
atccgtggcttgccggtggggcaagcgctggacgaaactgccatccgcgccggtttcgaa
cgctttaaggccgagaagaagacccgggaactgactgatatcgccaccaagcatgggctg
gccgccgaggcactacaagccttcgtggatgacgtgctgcgtcgccgcatcttcgatggc
gaagcgttgagtgagttgatggctccgctgggcttgggctggaaggcgcgtacgcagaag
gagttggcgctggtggaagacctgacgccgctactgcacaagctcgctcaggggcgcgag
atttcggggctgagtgcgtatgaacaataa

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