Pararhodospirillum photometricum: RSPPHO_01879
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Entry
RSPPHO_01879 CDS
T01851
Name
(GenBank) ABC transporter component
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rpm
Pararhodospirillum photometricum
Pathway
rpm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RSPPHO_01879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpm02000
]
RSPPHO_01879
Transporters [BR:
rpm02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RSPPHO_01879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
TOBE
SMC_N
AAA_21
AAA_22
Rad17
nSTAND3
FeoB_N
AAA_25
AAA_29
Arginosuc_syn_C
Motif
Other DBs
NCBI-ProteinID:
CCG08505
UniProt:
H6SKJ0
LinkDB
All DBs
Position
2251496..2252584
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AA seq
362 aa
AA seq
DB search
MGEDILVAFRGVQKTYDGDSLVVKDLNLDIRRGEFLTLLGPSGSGKTTSLMMLAGFEVPT
HGDIMLAGKSLRATPPHRRDIGMVFQNYALFPHMTILENVMFPLKVRRVASDDARQRARD
ALAMVRLDALESRRPAQLSGGQQQRVALARALVFRPQLVLMDEPLGALDKQLREHMQIEI
KHLHAQLGVTVVYVTHDQTEALTMSDRIAVFNDGVIQQLDSPRGLYELPRNSFVAHFIGE
NNVLHGTVESVTEGFVQVRLDDGQRITARAVVGAGPGSRTSVSIRPERIHLDDIGPEANQ
LPGLIEETIYHGDHVRVRARIAGNPDFTIKLRYRASRILPETGAAVVAAVAPEDCLALDP
VG
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggatatcctcgtcgcgttccgaggcgtacagaagacctacgacggtgactcc
ctggtcgtgaaggatctgaacctggacatcaggcgcggggagtttctcaccctgctcgga
ccatcgggatcgggcaagaccacgtccttgatgatgctcgctggatttgaggttccgacc
cacggggacatcatgctggccgggaaatccttgcgggcgaccccgccgcaccggcgcgat
attggcatggtctttcagaactacgccttgtttccccacatgacgatcctggaaaacgtc
atgttccccctgaaagtccggcgcgttgccagcgatgacgcccgccagcgcgcgcgggac
gccttggccatggttcggctggatgccctggaaagccgccgcccggcccaattgtccggg
ggccagcagcagcgcgttgccctggcccgggccttggtgttccggccgcagttggtgttg
atggacgagccgctgggcgccctcgacaagcagttgcgcgagcatatgcaaatagaaatc
aagcatttgcacgcccaactcggggtgacggtggtttacgtcacccacgaccagaccgag
gcgctgaccatgtcggaccgcattgcggtgttcaacgatggggtgatccagcaactcgat
tccccgcggggtctttatgagctgccgcgcaacagctttgtggcccacttcatcggcgaa
aacaacgtcttgcacggtactgttgagagtgtgaccgagggctttgtccaggtgcgtctc
gacgacggccagcgcatcacggcgcgggccgtcgtgggggcggggccgggcagccggacc
agcgtgtccattcgccccgagcggattcacctcgacgatatcggtcccgaggccaaccag
cttcccggtctgatcgaggaaaccatttatcacggcgaccatgttcgggtgcgggcccgt
atcgcgggcaacccggactttaccatcaaattgcgctaccgggcgtcgcgcatcctcccc
gagacgggcgcggccgtggtggccgccgtcgcgccggaggattgtctcgcgctggatccg
gtgggctga
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