Rodentibacter pneumotropicus: NCTC8284_00002
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Entry
NCTC8284_00002 CDS
T05800
Symbol
nanB_1
Name
(GenBank) sialidase NanB
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
rpne
Rodentibacter pneumotropicus
Pathway
rpne00511
Other glycan degradation
rpne00600
Sphingolipid metabolism
rpne01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpne00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
NCTC8284_00002 (nanB_1)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
NCTC8284_00002 (nanB_1)
Enzymes [BR:
rpne01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
NCTC8284_00002 (nanB_1)
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Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
BNR
Reelin_subrepeat-B
Motif
Other DBs
NCBI-ProteinID:
VEH64880
UniProt:
A0A448MI99
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All DBs
Position
1:492..3341
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AA seq
949 aa
AA seq
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MGSLKRANYPSNNFVGSIYHARATDDVLSNEAIAALHRDIVEKQKADIAKNAEKIAFFAE
KRSAMGAMMSEKYEIFKPGQGGAKSYRIPGLFTTKDGVVIAAIDKRNQHFYDWGNIDLAI
RRSLDGGFTWQDDQVVVDLAEQPYPDLGAAESALVIDAVMTQDKNTGRIIMVFDMFPESQ
ALFGMFNNSQASFESEGNGHINVNGKWYRLITDESGARYTVREGGIIYNRDGVAQDYKVI
TEGDPAQAFQNLGDIIKISTDERVGNIFLRSKRAGHDSGPFNAHYTSYLWMTYSDDNGKT
WANPTDITTQVKADWMRFLGTGPGTGIQLKNGNIMIPVYFTNRDNKQSAAVIISSDGGKT
WTRGASPNDAYLDEIGGARYLNTQDYEITESQVIEMNNGDIKMFSRNRSGAVIISTSHDG
GMTWDKGARLRESALLDPYSQMSVIHYSKLIDGKEYIVFANPHASSRRNGKAWLGEVQTD
GSILWKYNTTIDEGSYSYNSLTELPNGDIGLLYEQVQGSNVQYVRFNLQELLWKDNFIYR
DKRNPENQAVSLNSIEQETYYKIGDGEMIKVGEGINPAHLEVREGIATLAQQANAAGEKQ
AYAAVVVKEKGTLRLMDNEQLNLSNIRLEKGTFDLNGRNFTLAAKVDTENQGLRAATLNG
NIINNSPTPATLTYQLNQQRAIIGTVGDQQGTLNLIYSPTESESQLSFQGNTNLDNVYVK
AGTLSYTGNRHQANRLDLSPHSQVEIKNDASFTSHHIHLAENANLILNTDTAIEFSSKVE
GTGNLFKTGAGYARVNGELNHEGITDIQSGIFEVNGNINKSAVNIRQNSILAGGGEIKNE
TTLFEEAVISPSLFITNPQTFRGNTLSFNQLNNQGGKFILTVNNNAENIKDWKHDQVLIN
DLNSEMDIPIDIHLLGTQQGHSDENKNGRYDADEGISLIQTKTQMPCNG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
gtgggatcattgaaacgcgctaattatccgtcaaataattttgtgggttcaatttaccat
gcccgcgcaacagatgatgtgttatcaaacgaggctatcgcagccttacacagagatatt
gtggaaaaacaaaaagccgatattgccaaaaatgccgaaaaaatcgcattttttgccgaa
aagcgttctgccatgggcgcaatgatgagcgaaaaatatgaaatttttaagccagggcaa
ggcggagcgaaaagctatcgtatcccagggttatttacaaccaaagacggcgtggtgatt
gccgcaatcgacaagcgtaatcaacatttttatgactggggaaatattgatttggcgatt
cgtcgcagtttagacggagggtttacttggcaggatgatcaagttgtggttgatttggcg
gaacaaccttatccagatcttggtgcggcagaatcggcattagtgattgatgcagtaatg
acacaggataaaaataccggaagaataataatggtttttgatatgttccccgaatcacaa
gctctttttggtatgtttaacaattcacaggcaagttttgagtcagagggaaacgggcat
attaatgtcaacggaaaatggtatcgcctaattaccgatgaaagtggcgcgagatacaca
gttcgcgaggggggcattatctataatcgtgatggtgttgctcaagattataaagtaatc
acagagggcgatcctgctcaggcatttcaaaatcttggcgatattatcaagatcagtacg
gatgaacgggtcggcaatatttttctccgctcaaaacgtgccgggcatgatagcggcccc
tttaacgcacactataccagttatttatggatgacttatagcgatgacaacggcaaaaca
tgggcaaatcctacggatattaccacgcaagtcaaagcagattggatgcgatttttaggt
acaggtccaggaaccggcattcaattaaaaaacggcaatattatgattccggtttatttt
accaatcgggacaataaacaatctgctgctgtgattatcagttcggacggtggaaaaact
tggactcggggcgcttcgccaaatgatgcctacttagatgaaatcggtggagcacgttat
ttaaacacgcaagattacgaaatcaccgaatcccaagttatcgaaatgaataacggtgac
attaaaatgttttcccgtaaccgtagcggtgctgttattatttcaaccagtcacgatggt
ggaatgacttgggacaaaggagcaagattaagagaatccgccttattagatccttattca
caaatgtccgtaattcattattccaaactgatcgatggcaaggaatatatcgttttcgcc
aatcctcacgccagttcccgacgcaacggtaaagcttggttgggagaagtacagactgac
ggttcaattttatggaaatataataccacgattgatgaaggctcttattcctataacagt
ttaacggaattaccaaacggtgatattggtttactttacgagcaagtacaaggctcgaat
gtgcagtatgtccgcttcaatttgcaagaactgttatggaaagataattttatctatcgt
gacaaacgaaaccctgaaaatcaggcggtatccctcaatagtatcgaacaagaaacctat
tataagattggtgacggtgagatgatcaaagttggggagggcatcaatccggcacattta
gaagtgagagaagggattgccaccctcgcccaacaagccaatgctgcaggagaaaaacag
gcttatgctgccgttgtagtgaaagaaaagggcacacttcgtttaatggataacgagcaa
ctcaacctcagtaacattagattggagaaggggacatttgatctcaacggacgtaatttt
acccttgctgctaaagtcgacacggagaatcagggattacgcgccgcaacgttaaacggc
aatatcatcaataatagcccgacaccagcaaccttgacctatcagctcaatcagcaacgg
gcaattatcggaacggtaggtgatcagcaaggcacactcaacctcatctattccccaaca
gagtctgaaagccaattatcgtttcaagggaataccaatttggataatgtttatgtcaaa
gcaggtacattgagttacacaggaaacagacatcaggcaaacaggcttgatctatctccg
catagtcaagttgaaattaaaaatgatgcctcattcacctcccaccacatccacttggcg
gaaaatgcaaacctcatcttgaatacggatacagccattgaatttagctcaaaagttgaa
ggcacaggaaatttattcaaaaccggagcaggctatgcgagagtaaacggagagcttaat
cacgaaggaataacggatattcaaagcggtatctttgaagtaaatggcaatatcaacaaa
agtgcggtcaatattcggcaaaattcaatattggcaggaggaggggaaatcaaaaacgag
acaacgctatttgaagaagctgtaatttcaccaagtttatttattaccaatccacaaaca
tttcgtggcaacacgttgtcatttaaccaactaaacaaccaaggcggaaaatttattctc
actgtaaataataatgccgaaaatataaaagattggaagcacgatcaagttttaattaac
gacttaaactcggaaatggatattccaatagatattcatttactcggtactcaacaaggt
cattccgatgaaaataaaaacggacgttatgatgcagacgagggaatttcattaattcaa
actaaaacgcaaatgccttgcaacggctga
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