Roseobacter ponti: G3256_00075
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Entry
G3256_00075 CDS
T06561
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rpon
Roseobacter ponti
Pathway
rpon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G3256_00075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpon03400
]
G3256_00075
Enzymes [BR:
rpon01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
G3256_00075
DNA repair and recombination proteins [BR:
rpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
G3256_00075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QJF49669
UniProt:
A0A858SL60
LinkDB
All DBs
Position
18103..19560
Genome browser
AA seq
485 aa
AA seq
DB search
MRHVVVPRIGAARAWRDTARDLLLSGVPPEEVTWGGTGQDRGLFDTPGPGPASPSSDRIT
VPRSFLQMADTVIWHSDPTRFARLYAFLWRLKEAPHLMSDRGDAQLSRLRQMEKNVRRCQ
HKMKAFVRFREIGDPTDPRRSFAAWFEPTHHTVEPAAGFFARRFADMDWRILTPDISAVF
ENGKVRFEEDHPRPDLPEDASETLWVTYFRNIFNPARLKVQAMQSEMPKKYWKNMPEAAA
IPELIAGAPARAREMALNAPSLPPSRMAAVQAQQAHLTSAWDGLADDLPRQIRACTRCPL
HRSATQAVPGEGPLSARLMIVAEQPGDQEDLQGRPLVGPAGQLFDRIAGDAGLDRNAAFI
TNAVKHFKFRPRGRQRIHQRPDAGETEHCRWWLESEINLIRPVVILALGATAALSLTGSG
TDLMQRRGRAEAGPGGIPVLITLHPAYLLRQPDVDKKAAATDQFRSDLALAQRMSEDTGS
SRERA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaggcacgtcgttgtgccccgcatcggtgccgcccgtgcctggcgggatacggcgcgc
gatctgcttttgtccggggtcccgccggaggaagtcacatggggtggtacaggacaggac
cgcgggctctttgacactcccggccccggccctgccagcccttcatcagaccggatcacg
gtgccacgcagctttttgcagatggccgatacggtcatctggcacagcgatcccacgcgt
tttgcgcggctctatgcgtttttgtggcgtcttaaagaggcgccgcatctgatgagtgac
agaggtgatgcgcagctgtcgcgcctccggcagatggagaaaaatgtgcggcgctgccag
cacaaaatgaaagcctttgtgcggtttcgcgagatcggcgacccgaccgacccgcgccgg
tcttttgcagcatggtttgagcccacgcatcatacggtggagcctgcagccggtttcttt
gcacggcgcttcgccgatatggactggcgcattctgaccccggatatctcggccgtgttc
gagaacggcaaagtgcggtttgaagaggatcacccccgccccgatctgccggaggatgcc
agcgaaaccctttgggtgacttattttcggaacatcttcaatccggcccggctcaaggtt
caggccatgcagtccgaaatgccaaagaaatactggaagaacatgcctgaggcggcagcg
atcccggaactcatcgcgggagcgcctgcgcgggcacgcgagatggctctgaacgcgccc
agtttgccgccgtcccgcatggccgccgtgcaggcacagcaggcgcatctcacctccgca
tgggacgggcttgcggatgatctgccgcgtcagatcagggcctgcacacgatgcccgctg
caccgcagcgcgactcaggctgtcccgggcgaagggcccctttcggcacggctgatgatc
gttgcggaacagcccggcgatcaggaagacctgcaggggcgcccactcgtcgggccggcg
gggcagctttttgaccgcatcgccggtgacgccggcctcgaccggaacgccgctttcatc
acgaatgcggtgaagcatttcaaattccgtccgcgcggacggcagcgcattcaccagcgt
ccggatgccggtgaaacagagcattgcaggtggtggcttgagtctgagataaatcttatc
aggcctgtcgtgatcctcgcactgggtgcaacggcggcgctgtcgctgaccggatcaggc
accgatctgatgcagcgtcgcggcagggcagaggccgggccgggtggtattccggtcctg
atcacgctgcatccggcatatcttctccgacagccggatgtggataaaaaggctgctgcc
accgatcagttccgcagcgatctggccctggcacagcgtatgtcggaagatactggttca
tcacgggaacgcgcctga
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