Rhodococcus pseudokoreensis: JWS13_21145
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Entry
JWS13_21145 CDS
T08508
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
rpsk
Rhodococcus pseudokoreensis
Pathway
rpsk00550
Peptidoglycan biosynthesis
rpsk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpsk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JWS13_21145 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpsk01002
]
JWS13_21145 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpsk01011
]
JWS13_21145 (dacB)
Enzymes [BR:
rpsk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JWS13_21145 (dacB)
Peptidases and inhibitors [BR:
rpsk01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
JWS13_21145 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rpsk01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
JWS13_21145 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
QSE95494
LinkDB
All DBs
Position
complement(3504515..3505900)
Genome browser
AA seq
461 aa
AA seq
DB search
MGSLAGRHRRNMRILFASVVVVVLAMAAVLVVAVGAHNASAGRGELTIAPEPAPIIAAPQ
VTPVPDDAPMPSAQGIAAAVGPAAANPDLGKFSGTVADAVTGQVLWSVNPQTPMTPASTT
KVLTAGSALLSLPSDHRVTTKVVQGAAPGEIVLVAGGDPTLTAKPVGENGYYPGAAHISQ
LVDQIRNAGIQVTRIVVDTSIYSGDTMAQGWFPTDVGAGFITPTEPIMIDGGRADPLVDE
SPRSSTPALDAGRTLANALGVDPSAVASGVAAPGAATVASVQSAPLRDRLRQMMEHSDNV
LAEAIGREVAMNAGAEASFAGAVATIGQTLTGAGFDLSGLTLHDASGLSVDDRIAPHTLD
QVLTAAAGEGNPALRPMLDYLPVAGATGSLSDRYASGNRTGAGWVRAKTGTLSTASALAG
YVVDQNGRVLTFALMSNDRPPEVSRPALDALAAALRTCGCQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgttggcgggacgccaccgtcggaacatgcgaattctgttcgcgtcggtcgtc
gtcgtggtgctcgcgatggccgccgtgctggtggtcgcggtgggcgcgcacaacgcgtcg
gcggggcgcggcgaactgacgatcgcccccgaaccggcaccgatcatcgcggccccgcag
gtcacgccggtcccggacgacgcgccgatgccgagcgcgcaggggatcgccgcggcggtc
ggtccggccgccgccaacccggacctcggcaagttcagcggaacggtcgccgacgccgtc
accggtcaggtgctgtggagcgtcaacccgcagaccccgatgacgcctgcgtccaccacc
aaggtcctcaccgcgggatccgcgctgctgtcgttgccgtccgaccaccgcgtcacgacg
aaggtggtgcagggggcggctcccggggagatcgtcctcgtcgccggtggtgatcccact
ctcaccgcgaagccggtcggggagaacggctactacccgggtgcggcgcacatctcgcaa
ctggtcgatcagatccggaacgcgggcatccaggtgacgcgcatcgtggtcgacacgagc
atctactcgggcgacaccatggcgcagggatggttcccgaccgatgtcggcgccggattc
atcacccccaccgagccgatcatgatcgacggcggacgcgccgacccgctcgtggacgag
tcgccgcgtagttcgacgcccgcgctcgacgccgggcggacgctggcaaatgcgctcggc
gtcgacccgtcggcggtcgcgtcgggggtcgcggcacccggagccgccacggttgcgagt
gtgcagtccgcgccgctgcgcgaccggttgcggcagatgatggaacactcggacaatgtg
cttgccgaagcgatcgggcgggaggttgccatgaatgccggcgcggaagcatcgttcgcg
ggcgccgtcgcgaccatcggccagaccctgaccggtgccggcttcgatctgtcggggctc
acgctgcacgacgcgagcgggctgtccgtcgacgaccgcatcgcgccgcacaccctcgac
caggtgctgacggccgccgccggggaggggaatcccgccctgcggccgatgctcgactac
ctgccggtggcaggcgccacgggcagcctgtcggaccggtacgcgtcgggcaaccgcacc
ggcgccggatgggtgcgcgcgaagaccggcaccctgtccacggccagcgccctcgccggc
tacgtggtggaccagaacgggcgcgtcctcacgttcgcgctgatgtccaacgaccgccca
ccggaggtcagccgtcccgccctcgacgcactggcggccgcgctccgcacgtgcgggtgc
cagtga
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