Rhodopseudomonas palustris TIE-1: Rpal_5122
Help
Entry
Rpal_5122 CDS
T00722
Name
(GenBank) Ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
rpt
Rhodopseudomonas palustris TIE-1
Pathway
rpt00630
Glyoxylate and dicarboxylate metabolism
rpt00710
Carbon fixation in photosynthetic organisms
rpt01100
Metabolic pathways
rpt01110
Biosynthesis of secondary metabolites
rpt01120
Microbial metabolism in diverse environments
rpt01200
Carbon metabolism
Module
rpt_M00165
Reductive pentose phosphate cycle (Calvin cycle)
rpt_M00612
Anoxygenic photosynthesis in purple bacteria
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rpal_5122
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
Rpal_5122
Enzymes [BR:
rpt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Rpal_5122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ACF03611
UniProt:
B3QB68
LinkDB
All DBs
Position
complement(5506084..5507469)
Genome browser
AA seq
461 aa
AA seq
DB search
MDQSNRYANLNLKESELIAGGRHVLCAYIMKPKAGFGNFIQTAAHFAAESSTGTNVEVST
TDDFTRGVDALVYEVDEANSLMKIAYPIELFDRNVIDGRAMIASFLTLTIGNNQGMGDVE
YAKMYDFYVPPAYLKLFDGPSTTIKDLWRVLGRPVINGGFIVGTIIKPKLGLRPQPFANA
CYDFWLGGDFIKNDEPQGNQVFAPFKDTVRAVADAMRRAQDKTGEAKLFSFNITADDHYE
MLARGEFILETFADNADHIAFLVDGYVAGPAAVTTARRAFPKQYLHYHRAGHGAVTSPQS
KRGYTAFVLSKMARLQGASGIHTGTMGFGKMEGEAADRAIAYMITEDAADGPYFHQEWLG
MNPTTPIISGGMNALRMPGFFDNLGHSNLIMTAGGGAFGHVDGGAAGAKSLRQAEQCWKQ
GADPVEFAKDHREFARAFESFPQDADKLYPNWRAKLKPQAA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtcgaaccgctacgccaacctcaacctcaaagagagcgagctgatcgcgggc
ggacggcacgtgctgtgcgcctacatcatgaagccgaaggccggcttcggtaacttcatc
cagaccgccgcgcacttcgccgccgaatcctcgaccggcaccaacgtcgaagtctccacc
accgacgacttcacccgtggcgtcgacgcgctggtgtacgaggtcgacgaggccaacagc
ctgatgaagatcgcgtatccgatcgagctgttcgatcgcaacgtgatcgacggccgcgcc
atgatcgcctcgttcctgaccctgacgatcggcaacaaccagggcatgggcgacgtcgaa
tacgccaagatgtacgacttctatgtcccgccggcgtatctcaagctgttcgacggcccg
tcgacgaccatcaaggatctgtggcgcgtgctcggccgcccggtgatcaacggtggcttc
atcgtcggcaccatcatcaagccgaagctcggcctgcgcccgcagccgttcgccaacgcc
tgctacgacttctggctgggcggcgacttcatcaagaacgacgagccgcagggcaaccag
gtgttcgcgccgttcaaggacacggtgcgtgccgtggccgacgcgatgcgccgcgcgcag
gacaagaccggcgaggccaagctgttctcgttcaacatcaccgccgacgatcactacgaa
atgctggcgcgcggtgagttcatcctcgagaccttcgccgacaacgccgaccacatcgcg
ttcctggtcgacggctacgtcgccggcccggccgcggtcaccaccgctcgccgcgcgttc
ccgaagcagtacctgcactaccatcgcgccggccacggtgcggtgacctcgccgcagtcc
aagcgcggctacaccgccttcgtgctgtcgaagatggcgcgtctgcagggcgcctcgggc
atccacaccggcaccatgggtttcggcaagatggaaggcgaagcggccgaccgcgcgatt
gcctacatgattaccgaggacgctgctgacggtccgtacttccaccaggagtggctcggc
atgaacccgaccaccccgatcatctccggcggcatgaacgcgctgcggatgccgggcttc
ttcgacaacctcggccactccaacctgatcatgacggcgggcggtggtgcgttcggtcac
gtcgacggcggcgcggcgggtgcgaagtcgctgcgtcaggccgagcagtgctggaagcag
ggcgccgatccggtcgagttcgccaaggatcaccgcgaattcgcccgcgccttcgagagc
ttcccgcaggacgccgacaagctgtatccgaactggcgcgccaagctgaagccgcaggcg
gcgtaa
DBGET
integrated database retrieval system
