Ralstonia pseudosolanacearum RS 476: CDC45_23480
Help
Entry
CDC45_23480 CDS
T05645
Name
(GenBank) choline dehydrogenase
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Pathway
rpu01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
CDC45_23480
Enzymes [BR:
rpu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
CDC45_23480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
Abhydrolase_1
DAO
Abhydrolase_6
Pyr_redox_2
FAD_oxidored
Hydrolase_4
FAD_binding_2
NAD_binding_8
Fer4_9
Pyr_redox
Fer4_2
Fer4_6
GIDA
Lycopene_cycl
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
AST30137
LinkDB
All DBs
Position
unnamed:1466396..1469848
Genome browser
AA seq
1150 aa
AA seq
DB search
MVRIATPLSEIKEHYDIVVIGSGYGGGIAASRMARAGRTVCLLERGREIIPGEYPNTLAE
ATEEFQVHHPDGHIGSRTGLYDLHVNAQQNVVVGCGLGGTSLINANVSLEPEPQVFEDPR
WPRHVREHADTLLKEGFARAREMLRPTPYPGTAAALPKLQANEKSASQMQAPHTFYRPPI
NVTFDDLPDNRNHVGVEQLRCNDCGDCVSGCNNKAKNTTLMNYLPDASNHGAEIFCQASV
RYLERDGDGWIVHYQYVGTGREAFDAPTLFVKANIVVLSAGTLGSTEILLRSRTQGLLLS
EKLGKHMSGNGDILGFGYNNNDKINGIGFGAHSGKGIGPVGPCITSIIDMRDEKDWTQRM
VIEEGSIPGALGRAIVPAMAAASTQIGRPTSTGVAAKIAHAAREVESAVLGPYYGAVNRL
QTYLIMSHDNGAGEMKLDDHDQLRVHWPGVGEQPNFKIGNDRLYDATRALGGTYVPNPIW
TDLFKHSLITVHPLGGCVMGEDAAQGVVNHKGQVFSSASGSDVYPGLYVTDGSVIPTSLA
VNPLLTISAVSERTMALLAQDRGWKIDYTLPSAPSKPARPVKPGIEFTEAMKGYVSLAHR
QAQGTDPAVYEAAYQAGKDAGSTMAFIVTIRSDDLDQLIANPQHPATIVGTLNAPALSAR
PLTVSHGVFNLFEAFPEQVGVRHMNYNMALTAEDGKEYFFSAFKSVPSDHSVLRAWADTS
TLYVTVYDGTDNTGPVVGSGVLHIEPADFAKQMTTMKVLNASGEAERLKDLARFGKYFAG
VLWESYGGVLAGNAYFNPDAPPRKKRPLNAGAPEVLFFQTEDNVTLRLTRFQGGSKGPVM
LVHGLGVGSNIFSTDTIATNLLEFLYQHGYDVWLLDFRVSILLEASRQQCDGDQIARYDF
PAAIDRIRQATGADDVQCVVHCYGATTFFMSLLAGLQGVRSVVCSQIATDIVVPPATAAK
TGLHIPSVLDKLGVKSLTAYTQANADWLEKLYDTALKGYALVEAQGYCNNPVCHRITFMY
ASLYRHETLNESLHDNLHELFGVANMRTMEHLALMCRTGHLVGFGGEDIYMPHLDRLQLP
ILFISGAQNECYLPESTRRTYQQLVDRFGPERYSRLVIPGYGHIDCMFGKNAAMDVYPAI
LAHLDKTASA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggtacgaattgcgacgccactcagtgaaatcaaggagcattacgacattgtggtgatc
gggtccggctatggcggaggcattgctgcatcgcgcatggcgcgagcgggccgcacagtc
tgtctgctggagcgcggccgcgaaatcattcccggcgaatatcccaataccctggcggag
gcgacggaagagtttcaagtccatcaccccgatggccatatcggctcacgcaccggtttg
tacgatctgcatgtcaatgcccagcaaaacgtcgtcgtgggctgtggcctgggcggcacc
tcgctgatcaacgccaacgtctcgctggagcccgagcctcaggtcttcgaagacccccgc
tggccccggcacgtgcgtgagcatgccgataccttgctcaaggaaggcttcgcccgggcg
cgggaaatgctccggcccaccccttaccccggcacggcggccgccttgcccaagctgcag
gccaacgaaaagtccgcctcgcagatgcaggctccgcacaccttctatcgcccgcccatc
aatgtcacgttcgacgacttgccggacaaccgcaaccacgtgggcgtggagcaattgcgc
tgcaacgattgcggcgactgtgtctccggctgcaacaacaaagccaagaacaccacgctg
atgaactacctgcccgatgccagcaatcacggcgcggagattttctgccaggcatcggtc
cgctatctggagcgcgatggcgatggctggatcgtgcactaccagtatgtcggcaccggg
cgggaggcattcgatgcgccaacgctgttcgttaaagccaacatcgtcgtactctccgcc
ggcacgttgggctcgacggagatcctgctgcgttcgcgcacccagggcttgctgctctcc
gagaagctgggcaagcacatgagcggcaacggcgacatcctgggcttcggttacaacaac
aacgacaagatcaacggcatcgggttcggcgcgcactccggcaaaggcatcggcccggtg
gggccctgcatcacctccatcatcgacatgcgcgatgagaaggactggacgcagcgcatg
gtgatcgaagaggggtcgatcccgggagccctcggccgcgccatcgtgcccgccatggcc
gccgcatcgacgcagatcggacggccgacctctaccggggtggccgccaagatagcgcac
gccgccagagaggtggagagcgcggtactggggccctactacggggcggtcaatcgcctg
caaacctatctgatcatgagccacgacaatggcgcgggcgagatgaagctggacgaccac
gaccaactgcgcgtccactggcccggcgtgggagaacagcccaacttcaagatcggcaac
gaccgactgtatgacgccacgcgcgcactgggcggcacctatgttcccaatcccatctgg
accgacctgttcaagcacagcctgatcaccgtccacccgctgggcgggtgcgtgatgggc
gaggacgcggcacagggcgtcgtcaaccacaaggggcaagtgttcagcagcgcgtcaggc
agcgatgtctacccggggctgtacgtgaccgatggctcggtcatccccacttcactggcg
gtcaacccattgctgaccatttcggctgtcagcgagcgaacgatggccttgctggcgcaa
gaccggggctggaagatcgactacaccttgccgtcggcgcccagcaagcccgcccggccc
gtcaagccgggcatcgaattcaccgaagccatgaaagggtatgtctccctggcccatcga
caggcgcaaggcaccgatcccgccgtctacgaggcggcctaccaggccggcaaggacgct
gggtccaccatggcgtttatcgtgacgatcaggtccgacgacctggaccaattgatcgcc
aatccccagcatccggccacgatcgtcggcacactgaatgcccccgctttgtctgcgcgg
ccgctgacggtgagccatggcgtgttcaatctgtttgaggcatttccggaacaggttggc
gtgcggcacatgaactacaacatggcgctaaccgccgaagacggcaaggaatacttcttc
agcgccttcaagtcggtgcccagcgaccacagcgtgttgcgagcgtgggccgacaccagc
acgctctatgtcacggtctacgacggcacggacaacaccggaccggtcgtcggatcgggc
gtcctgcatatcgaaccggccgacttcgccaagcagatgaccacgatgaaggtcctcaac
gcctccggcgaggctgagcgcctgaaagatctggcccgtttcggcaagtattttgccggg
gtgctatgggagagctacggcggggtactggccgggaacgcctacttcaacccggatgcc
cctccgcgcaaaaagcgcccgctcaacgccggcgcgccggaagtgctgttcttccagacc
gaggacaacgtgacgctgcgcctgacccgctttcagggcggcagcaaggggccggtgatg
ctggtgcacggcctgggcgtggggtcgaacattttctcgaccgacaccatcgccaccaat
ctgctggagttcctctaccagcacggctacgacgtctggttgctcgatttccgcgtcagc
atcttgctggaggccagccggcagcaatgcgatggcgaccagatcgcgcggtacgacttc
ccggctgccatcgaccggattcgccaagccaccggagccgacgacgtgcaatgcgtggtg
cattgctatggcgccaccacgtttttcatgtccctgctggccggtctgcagggtgtgcgc
tccgtcgtgtgctcgcagattgccaccgacatcgtcgtgcccccggcaaccgccgccaag
accgggctgcacatcccatcggtgctggacaagctcggcgtgaagtccctcaccgcctat
acccaggccaacgccgactggctcgaaaaactctatgacacggcgcttaaaggctatgcg
ctggtcgaagcacaaggctattgcaacaacccggtctgccaccgcatcaccttcatgtat
gcctcgctgtaccgccacgaaacgctcaacgaatccctgcacgacaacctgcatgagctg
ttcggcgtggccaacatgcggaccatggagcatcttgccctgatgtgccggacgggccat
ctggtgggcttcggcggagaagacatctacatgccgcacctggacaggctccagttgccg
atcctgttcatcagcggagcgcagaacgaatgctatctgcctgaaagcacccggcgcacg
tatcagcaactggtggatcgctttggcccggaacggtacagccggctggtcataccggga
tacggccatatcgactgcatgtttggcaagaatgccgccatggatgtctatccggccatc
ctggcccacctggacaaaaccgcctcggcctga
DBGET
integrated database retrieval system