Rhodopseudomonas palustris DX-1: Rpdx1_0372
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Entry
Rpdx1_0372 CDS
T01381
Name
(GenBank) Ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00630
Glyoxylate and dicarboxylate metabolism
rpx00710
Carbon fixation in photosynthetic organisms
rpx01100
Metabolic pathways
rpx01110
Biosynthesis of secondary metabolites
rpx01120
Microbial metabolism in diverse environments
rpx01200
Carbon metabolism
Module
rpx_M00165
Reductive pentose phosphate cycle (Calvin cycle)
rpx_M00612
Anoxygenic photosynthesis in purple bacteria
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rpdx1_0372
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
Rpdx1_0372
Enzymes [BR:
rpx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Rpdx1_0372
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ADU42013
UniProt:
E6VIY3
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All DBs
Position
407852..409150
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AA seq
432 aa
AA seq
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MTPDDIAGFYARRSELNLDDYIELDFDFECAGDPREAAAHLCSEQSTAQWRRVGFDEDFR
PRFAAKVLELSAEPRPSGFSTSVECAARGEVHACRVTIAHPHGNFGAKIPTLLSAVCGEG
VFFSPGIPLIRLQDIRFPDAYLAAFDGPRFGIAGLRERLQAFDRPIFFGVIKPNIGLPPQ
PFAELGYQSWSGGLDIAKDDEMLADVEWCPLAERAALLGDACRRASAETGVPKIYLANIT
DEVDRLTELHDVAVANGAGALLVNAMPVGLSAVRMLRKHATVPLMAHFPFIAAFSRLANY
GIHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVLDCIRACLEPMGPIKPCLPVPGGSD
SAATLENVYRKVGSADFGFVPGRGVFGHPMGPAAGAASIRQAWDAIAAGIPVADHAAGHP
ELAAALQAFGGR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggacgatatcgcgggcttctatgcccgccgcagcgagctcaatctcgacgat
tacattgagctggatttcgatttcgaatgcgccggagatccgcgcgaggccgcggcgcat
ctgtgcagtgagcagtcgaccgcgcagtggcgccgggttggtttcgacgaggacttccgc
ccgcgcttcgccgccaaggtgctggagctgtcggccgagccgcggccctcgggcttcagc
acgtcggtcgaatgtgcggcgcgcggcgaggtgcacgcctgccgcgtcaccatcgcgcat
ccgcacggaaatttcggcgccaagattccgacgctgctgtcggcggtgtgcggcgagggc
gtgttcttctcgcccggcattccgctgatccggctgcaggacattcggtttcccgacgcc
tatctggctgcgttcgacggtccgcgcttcggcatcgccggcctgcgcgagcggcttcag
gcgttcgatcgcccgatcttcttcggcgtgatcaagccgaacatcgggctgccaccgcag
ccgttcgccgagctcggctatcagagctggagcggtggtctcgacatcgccaaggacgac
gagatgctggcggatgtcgagtggtgcccgctcgccgagcgcgccgcgctgctcggcgac
gcttgccggcgcgcgtcggcggaaaccggcgtgccgaaaatctatctggccaatatcacc
gacgaggtcgatcggctgaccgagctgcacgacgtcgcggtcgccaacggcgccggcgcg
ctgctggtcaatgcaatgccggtgggcctgtccgcggtgcggatgctgcgcaagcacgcc
accgtgccgctgatggcgcatttcccgttcatcgcggcgttcagccgtctggcgaactac
ggcatccactcgcgggtgatgacgcggctgcagcggctcgccggtttcgacgtcgtgatc
atgcccggcttcggtccgcggatgatgacgccggagcacgaggtgctcgactgtatccgc
gcctgcctggagccgatggggccgatcaagccatgcctgccggtgccgggcggtagcgac
tcggcggcgacgctggagaatgtctatcgcaaggtcggcagcgccgatttcggctttgtg
cccggccgcggggtgttcggccacccgatgggcccggccgcgggggccgcgtcgatccgg
caggcttgggacgcaattgccgccggcatcccggtcgccgatcacgcggccggccatccg
gagctggcggcggcgctgcaggcgttcggcgggcgctga
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