Rhodopseudomonas palustris DX-1: Rpdx1_1828
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Entry
Rpdx1_1828 CDS
T01381
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00470
D-Amino acid metabolism
rpx00550
Peptidoglycan biosynthesis
rpx01100
Metabolic pathways
rpx01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rpdx1_1828
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rpdx1_1828
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Rpdx1_1828
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpx01011
]
Rpdx1_1828
Enzymes [BR:
rpx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Rpdx1_1828
Peptidoglycan biosynthesis and degradation proteins [BR:
rpx01011
]
Precursor biosynthesis
Amino acid ligase
Rpdx1_1828
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
ADU43441
UniProt:
E6VLT0
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All DBs
Position
1947382..1948371
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AA seq
329 aa
AA seq
DB search
MRHTILFGGTSKERLVSVASAQALQRALPDADLWFWNDDDRVHCVTAQTLLAHARPFEEP
FAPDGEMVGPLDIALDRAAAEHRLLVLGLHGGVAENGELQAMCELRRVPFTGSGAAASHL
AFDKAAAKRFAAIAGVRTSVGIALADAEAALETHGRLIAKPTRDGSSYGLFFINARQDLV
AVREAAKTEDYLIEPFVAGVEATCGVLEAEDGSLLALPPIEIVPADGGFDYTAKYLAKST
QEICPGRFAPEVAAMIMDYAVRAHRVMSCRGYSRSDFIVGKDGPIFLETNTLPGLTGASL
YPKALKAQGIDFVDFLKGQIALAGRSVRS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcgacacaccattctgttcggcggcaccagcaaagagcgactggtctcggtcgcttcg
gcgcaggcgctacagcgcgcgctgccggatgcggatttgtggttctggaacgacgacgat
cgcgttcattgcgtcaccgcgcaaacgttgctggcgcacgcaaggccgttcgaagagccc
ttcgcccccgatggcgagatggtcggtccgctcgatatcgcgctcgaccgcgccgcggcc
gagcacaggctcttggtgctcggcctccacggtggcgtcgccgagaacggcgagttgcag
gcgatgtgcgagctgcgtcgcgtaccattcaccggttcgggcgccgcagcctcgcatctg
gccttcgacaaggccgccgccaagcgcttcgccgcgatcgccggggtccgcacctcggtg
ggcatcgcgctggccgacgccgaggccgcgctcgagacccatggccggctgatcgccaag
ccgacccgtgacggttcgagctacgggctgttcttcatcaacgccaggcaggatctggtc
gcagtgcgcgaggcggccaagaccgaggactatctgatcgagccgttcgtcgccggcgtc
gaggcgacctgcggcgtgctcgaagccgaggacggctcgctgctggcgctgccgccgatc
gagatcgtgccggccgatggcggtttcgactacacggcgaaatatctcgccaaatccacc
caggagatctgccccggacggtttgcaccggaggtcgcggcgatgatcatggactatgcc
gtcagggcccatcgggtgatgtcgtgccgcggctactcgcgctccgactttatcgtcggc
aaggatggtccgatcttcctcgagaccaacacgctgcccggcctgaccggcgcctcgctc
tatcccaaggccttgaaggcgcaggggatcgacttcgtggacttcctgaagggacagatc
gcgctggccgggcgcagcgtccggagctga
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