Rhodopseudomonas palustris DX-1: Rpdx1_2069
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Entry
Rpdx1_2069 CDS
T01381
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00500
Starch and sucrose metabolism
rpx01100
Metabolic pathways
rpx01110
Biosynthesis of secondary metabolites
Module
rpx_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Rpdx1_2069
Enzymes [BR:
rpx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Rpdx1_2069
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
DUF3459
Glyco_hydro_31_2nd
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
ADU43677
UniProt:
E6VQ00
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Position
complement(2208734..2210938)
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AA seq
734 aa
AA seq
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MTDVSETLEPPAETAAAPEVASKSPEPPLYQVVHDSSAVREGLPYPLGACWDGHGTNFAL
FSANATKVEVCLFDGDTERRIELPEYTDEVFHGYIPDVGPGTFYGYRVYGPYEPENGHRF
NPNKLLLDPYARAHAGELTWAPAVFGYVMESGDDTTFDERDSARFVPKCVVVDPDFDWKG
EPGRKFVPWDQAIIYETHVKGFTKLHPEVPEDLRGTYAGFGTKPVVDYISSLGVTAVELL
PIHTFVNDSYLLDKNLVNYWGYNTIGFFAPDPRYAADVPNSLREFKEMVARLHDVGLAVI
LDVVYNHTAEGNELGPTLSFKGIDNASYYRLLPEQKRYYINDTGTGNTVNLTHPRVIQMV
NDSLRYWAGEMHIDGFRFDLGTILAREHYGFDEQSGFLKSVMQDPLLSSVKLIAEPWDCG
PGGYQVGGFPPGWAEWNDKFRDTVRDYWRGEAPAAALAPRLSASGDVFNRQGRRAWASVN
FITAHDGFTLNDWASYNDKHNAANGEDNRDGHSDNRSWNCGAEGPTDDETIVALRERQKR
NMLATLLLAQGTPMLLAGDEFGRTQNGNNNAYCQDNEISWVHWDHDEAAQHLLAFTQRLL
ELRRTTPTLRRSRFLTGQYDEELDVRDVTWINANGGEMQQEHWDDPNVKCFGMLLDGRAQ
TTGIHKHGEHATVLLVMNSFDGVVDFTLPEVPHGSTWSLLIDTNLPSGLPDEQFACGAVY
QVTARSVLLFGLSE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtcagcgaaaccctcgaaccgcccgctgagactgccgccgctcccgaggtc
gcctcgaaatcgcccgagccgccgctgtatcaggtggtgcacgactcctcggccgtgcgc
gagggcttgccctatccgctcggcgcctgctgggacggccatggcaccaacttcgcgctg
ttctccgccaacgccaccaaggtcgaagtctgcctgttcgatggcgataccgagcggcgc
atcgagcttccggaatataccgacgaggtgtttcacggctacatcccggatgtcggcccc
ggcaccttctacggctaccgggtctatggaccctacgagcccgagaacggccatcgcttc
aatccgaacaagctgctgctcgacccttacgcgcgcgcccatgccggcgagctgacctgg
gctccggccgtgttcggctatgtgatggagagcggcgacgacaccacattcgacgaacgc
gacagcgcacggttcgtgccgaaatgcgtggtggtcgatccggatttcgactggaagggc
gagcccggccgcaaattcgtgccgtgggaccaggcgatcatctacgaaactcacgtcaaa
ggcttcaccaagctgcatcccgaggtacccgaagatctgcgcggcacctatgcgggcttc
ggcaccaagccggtggtcgactatatttcctcactcggcgtcactgcggtcgagctgttg
ccgatccacaccttcgtcaacgacagttatctgctcgacaagaatctggtgaattactgg
ggctacaacaccatcggattcttcgcgcccgatccgcgctacgccgcggatgtgcccaac
agcctgcgcgagttcaaggagatggtggcgcggctgcacgatgtcggcctcgccgtgatc
ctcgacgtggtctacaaccacaccgccgaaggcaacgagctcggcccgacactgtcgttc
aagggcatcgacaacgccagctattatcgcctgctcccggagcagaagcgctactacatc
aacgacaccggcaccggaaacaccgtcaacctcacgcatccgcgcgtgatccagatggtc
aacgacagcctgcgctactgggccggcgagatgcacatcgacggttttcgcttcgacctc
ggcaccatcctggcgcgcgagcattacggcttcgacgagcagagcggctttctgaaatcc
gtgatgcaggacccactgctcagttcggtgaagctgatcgcagaaccgtgggattgcggc
cccggcggctatcaggtcggcggcttcccaccgggatgggcggaatggaacgacaaattc
cgcgatactgtgcgcgactattggcgcggcgaagcaccggctgcggcgctggcgccgcgg
ctgtcggcttcgggcgacgtcttcaaccggcaaggacgtcgcgcctgggcaagcgtcaac
ttcatcaccgcgcacgacggtttcaccctcaacgactgggcgagctacaacgacaagcac
aacgcggcgaacggcgaggacaatcgcgacggccactccgacaaccgctcgtggaattgc
ggcgcggaaggcccgaccgacgacgagaccattgtggcgctacgcgaacgccagaagcgc
aacatgctggcgaccctgctgctcgctcaaggcacaccgatgctgctggcgggcgacgaa
ttcggccgcacccagaacggcaacaacaacgcctattgccaggacaacgagatctcctgg
gtgcactgggaccacgacgaggccgcgcaacacctgctggccttcacgcagcggctgctg
gaactgcgccggaccacgccgacgttgcggcgcagccggtttctcaccggacaatacgac
gaagagctcgacgtccgcgacgtcacctggatcaacgccaatggcggggagatgcagcag
gagcactgggacgacccaaatgtgaaatgcttcggaatgctgctcgacggccgcgcccaa
accaccggcattcacaagcacggtgagcacgccaccgtgctgctggtgatgaacagtttc
gacggcgtggtcgacttcaccctgcccgaggtcccgcacggctcgacatggtcgctgctg
atcgacaccaacctgccgagcggcctgccggacgagcagttcgcctgtggcgcggtttat
caagtgaccgcacgttcggtgctgctgttcgggctgagcgagtga
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