Rhodopseudomonas palustris DX-1: Rpdx1_3960
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Entry
Rpdx1_3960 CDS
T01381
Name
(GenBank) Ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00630
Glyoxylate and dicarboxylate metabolism
rpx00710
Carbon fixation in photosynthetic organisms
rpx01100
Metabolic pathways
rpx01110
Biosynthesis of secondary metabolites
rpx01120
Microbial metabolism in diverse environments
rpx01200
Carbon metabolism
Module
rpx_M00165
Reductive pentose phosphate cycle (Calvin cycle)
rpx_M00612
Anoxygenic photosynthesis in purple bacteria
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rpdx1_3960
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
Rpdx1_3960
Enzymes [BR:
rpx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Rpdx1_3960
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ADU45516
UniProt:
E6VIT9
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All DBs
Position
complement(4246185..4247642)
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AA seq
485 aa
AA seq
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MNETTTIRGKDRYKSGVMEYKKMGYWEPDYEPKDTDVIALFRVTPQDGVDPIEAAAAVAG
ESSTATWTVVWTDRLTAAEKYRAKCYRVDPVPNSPGQYFAYIAYDLDLFEPGSISNLTAS
IIGNVFGFKPLKALRLEDMRLPIAYVKTFQGPATGIVVERERMDKFGRPLLGATVKPKLG
LSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRERFQYCMEAVNKAQAQTGEIKGTY
LNVTAATMEDMYERAEYAKELGSIIVMIDLVIGYTAIQSMAKWARKNDMILHLHRAGHST
YTRQRNHGVSFRVIAKWMRLAGVDHIHAGTVVGKLEGDPATTKGYYDICREDFNPMALEN
GLFFDQHWASLNKLMPVASGGIHAGQMHQLLHLLGEDVVLQFGGGTIGHPMGIAAGATAN
RVALEAMILARNEGRDYLHEGPEILAKAAQTCTPLKAALDTWKNVTFNYESTDTPDYAPT
PSVSV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagacaaccaccatccgcggcaaggaccggtacaagtcgggcgtgatggaatac
aagaagatgggctattgggagcccgactacgagccgaaggacaccgacgtcatcgcgctg
ttccgcgtcaccccgcaggacggcgtcgatccgatcgaagccgccgcggcggtcgccggc
gaatcctcgaccgcgacctggacagtggtgtggaccgatcgcctgaccgcggccgagaag
taccgcgccaagtgctaccgggtcgatccggtgccgaattcccccggccagtacttcgcc
tacatcgcctacgacctcgatttgttcgagccgggttccatctccaatctgaccgcgtcg
atcatcggcaacgtgttcggcttcaagccgctgaaggcgctgcggctcgaggacatgcgg
ctgccgatcgcctatgtgaagacgttccagggcccggcgaccggcatcgtggtcgagcgc
gagcgcatggacaagttcggccgtccgctgctcggcgccaccgtcaagccgaagctcggc
ctgtcgggccgcaactacggccgcgtggtgtacgaagcgctgaagggcggtctcgacttc
accaaggacgacgagaacatcaactcgcagccgttcatgcactggcgcgagcgcttccag
tactgcatggaggcggtcaacaaggcgcaggcgcagaccggcgagatcaagggcacctac
ctcaacgtcaccgcggcgacgatggaggacatgtacgagcgcgccgaatacgccaaggag
ctcggctcgatcatcgtcatgatcgaccttgtgatcggctacaccgcgatccagtcgatg
gcgaagtgggcgcgcaagaacgacatgatcctgcatctgcatcgtgccggtcactcgacc
tacacgcggcagcgcaatcacggcgtgtcgttccgcgtcatcgccaagtggatgcggctc
gccggcgtcgaccacatccatgccggcaccgtggtcggcaagctcgaaggcgatccggcg
accaccaagggctactacgacatctgccgcgaggacttcaacccgatggcgctggagaac
gggctgttcttcgaccagcattgggccagcctcaacaagctgatgccggtggcctccggc
ggcatccacgccggccagatgcaccagttgctccacctgctcggcgaagacgtcgtgctg
cagttcggcggcggcaccatcggccacccgatgggcatcgcggccggcgccaccgccaac
cgcgtcgcgctggaagccatgatcctcgcccgcaacgagggccgcgactacctgcacgaa
ggtccggaaatcctcgccaaggcggcgcagacctgcacgccgctgaaggccgcgctcgac
acctggaagaacgtgaccttcaactacgaatccaccgacacccccgactacgcgccgacc
ccgtcggtctcggtctaa
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