Rhodopseudomonas palustris DX-1: Rpdx1_4379
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Entry
Rpdx1_4379 CDS
T01381
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
rpx
Rhodopseudomonas palustris DX-1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
PAS_4
GGDEF
PAS
PAS_8
PAS_7
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ADU45931
UniProt:
E6VNT5
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Position
complement(4715120..4717747)
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AA seq
875 aa
AA seq
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MTTGLPSGAIAAENLAPPSYLGGSEPEVVWGLLIGGLVVASFMCAIALWATSMLRKQRRA
QRRKNMLVDSVLNKLQQGVVIADASGRIVFCNDRYLEMYRLTRAEVPRGLHGRELLTLRR
ARGMLDVSNDDFYRNAGLPGGYVSELPDGRCIQVKFSRLANGGTIATHDDCSELRRVTRE
LSTTKQFLESVIDNIPVCVAAKTIDDGRYILANRAFETLSGLSRDRIIGSTADDLYPPRS
AANIREADRSALKSSAGSDTSELTVEIGQGERVLASNRVVARNERGEPEFLIALFEDVTN
RRALSIELEKTKRFLELVIDNIPVALTVQNTADGRYVLANRGAEIIFNRRREDATGLTTA
EIFNTKEARLIAERDELAIRKGGLVVEEHPISTAGGLRLFVTRRMTVTDEADQAHYLIKT
HVDVTDRRQTEARMAHMAYHDGLTDLPNRDAFLKSLTQMIEACDNAVDEFAVLSVDLDGL
KEINDVFGHAIGDKLLVEVARRIEWAARGGVVARLSGDEFGLIIDGPQPAEARELASMVA
KALVPGFVIDGKTVRIGVTTGIALFPANGTDAASLLANAGAALFRAKAKARGSVTVFEPE
MDMQIRDRRVLHQDLSNAIRNGEMSLYYQPQASSTKRVGNNDIVGFEALTRWRHPTRGFV
PPSEFIPLAEESGLIVELGEWILREACRQAASWARPLQVAVNLSPAQFLNTDLVAFVHGV
LLQTGLEPGRLELEITEGVLIDDFDRGLSLLRRLKALGVRVSMDDFGSGYSSLTYLQAFP
FDKIKIDRAFIMNLGRNPQSAAIVRAVIGLGHGLGVTLVAEGVETQDQLDFLVDEACDAV
QGYLIGKPAPIDQYRWLVGLDPLEDSAPARAREAG
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccggtcttccttcgggtgcgatcgcggcagagaatcttgccccgccgagctat
ttggggggaagcgagccggaggtcgtctggggactgctgatcggcggcctggtcgtcgcg
tcgttcatgtgcgcgatcgcgctgtgggcgacctcgatgctgcgcaagcagcgccgcgcc
cagcgccgcaagaacatgctggtcgattcggtgctcaacaagctgcagcagggcgtcgtg
atcgcggacgcatccggccgcatcgtgttctgcaacgatcgctacctcgagatgtatcgg
ctgactcgtgccgaggtgccgcgcggcctgcacggccgcgaattgctgacgctacgccgc
gcccgcggcatgctcgatgtgtccaacgacgacttctaccggaacgccggattgccgggc
ggctacgtgtccgagcttcccgacgggcgctgcatccaggtcaaattctcccggctcgcc
aacggcggcacgatcgccacccatgacgactgcagcgaactgcgccgggtcaccagggag
ctctccaccaccaagcaattcctggaatcggtgatcgacaacattccggtttgcgtcgcc
gccaagaccatcgacgacggtcgctacatcctggccaatcgcgcgttcgagacgttgtcg
ggcctgagccgcgaccgaatcatcggatccaccgcagacgatctgtacccgccgcgttcg
gccgcaaacatccgcgaggcggaccggagcgcgctgaaatccagcgccggctccgacacc
tccgagctcaccgtcgagatcgggcaaggcgagcgcgttctcgccagcaaccgcgtggtg
gcccgcaacgaacgcggagagccggaattcctgattgcgctgttcgaggacgtcaccaac
cggcgcgcgctgtcgatcgaactggaaaagaccaagcggtttctcgagctggtgatcgac
aacattccggtggcgctgacggtgcagaacaccgcggacggccgctacgtgctcgccaat
cgcggcgcggagatcatcttcaatcgtcgccgcgaagacgccaccgggctgaccaccgct
gaaatcttcaacaccaaggaagcgcgactgatcgccgagcgcgacgaactggcgatccgc
aagggcggcctggtggtcgaggagcatccgatctcgaccgccggcggactgcgcctgttc
gtcacccggcgcatgaccgtcaccgacgaggccgatcaggcacactatctgatcaagacc
catgtcgatgtcaccgaccgacgccagacagaggcgcggatggcccacatggcgtatcac
gacggccttaccgacttgccgaaccgtgatgcgttcctcaagtcgctgacccagatgatc
gaggcgtgcgacaatgcggtcgacgaattcgccgtgctcagcgtcgacctcgacggtctg
aaggaaatcaacgacgtgttcggccacgcgatcggcgacaagctgctggtcgaggtggcg
cggcggatcgaatgggctgcgcgcggcggcgtggtggcgcgtctgtccggcgacgagttc
ggcctgatcatcgacggcccgcagccggccgaggcccgcgagctggccagcatggtggcg
aaggcgctggtcccgggcttcgtcatcgacggcaagacggttcggatcggcgtcaccacc
ggcattgcgctgttccccgccaacggcaccgatgcggcctcgctgctcgccaatgccggc
gccgcgctgttccgcgctaaggcaaaagcgcgcggctcggtcacggtgttcgagccggag
atggacatgcagatccgcgaccggcgggtgctgcatcaggatctgtcgaatgccatccgt
aacggcgagatgtcgctgtactaccagccgcaggcgtcgagcaccaagcgggtcggcaac
aacgatatcgtcggcttcgaagcgctgacccggtggcggcatccgacccgcggcttcgtc
ccgccgagcgagttcattccgctcgccgaggagagcggtctgatcgtcgagttgggcgaa
tggatcctgcgcgaggcctgccgtcaagcagcgtcctgggcgcgtccgttgcaggtcgcc
gtcaacctgtcgccggcgcagttcctcaacaccgatctggtcgccttcgtccatggcgtg
ctgttgcagaccgggttggagcccgggcggctggagctggagatcaccgaaggcgtgctg
atcgacgactttgatcgcggcctgtcgctgctgcgccggctgaaggcgctcggcgtccgg
gtgtcgatggacgatttcggcagcggctattcctcgctgacttacttgcaggcgttcccg
ttcgacaagatcaagatcgaccgcgccttcatcatgaatctcggccgcaatccgcaatcg
gccgcgatcgtccgcgccgtgatcgggctcggacacggtctcggcgtgacgctggtggcc
gagggcgtcgagacccaggatcagctcgacttcctggtcgacgaggcctgcgacgcggtg
cagggctatctgatcggcaagccggcgccgatcgatcagtatcgctggctggtcgggctc
gacccgctcgaagacagcgctccggcgcgcgcacgcgaagcgggctga
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