Rhodopseudomonas palustris DX-1: Rpdx1_4672
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Entry
Rpdx1_4672 CDS
T01381
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00350
Tyrosine metabolism
rpx00360
Phenylalanine metabolism
rpx00380
Tryptophan metabolism
rpx01100
Metabolic pathways
rpx01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
Rpdx1_4672
00360 Phenylalanine metabolism
Rpdx1_4672
00380 Tryptophan metabolism
Rpdx1_4672
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpx04147
]
Rpdx1_4672
Enzymes [BR:
rpx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
Rpdx1_4672
4.1.1.105 L-tryptophan decarboxylase
Rpdx1_4672
Exosome [BR:
rpx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Rpdx1_4672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ADU46219
UniProt:
E6VD36
LinkDB
All DBs
Position
5025384..5026862
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AA seq
492 aa
AA seq
DB search
MSDAIRAGANAGATSLDPDDWDALRADAHHMLDDMLDYIAGVRDRPVWQPIPPTVRAGFA
EPLPRQGTPLPEVYRRFTEEIAPYATGNVHPGFMGWVHGGGTAVGMLAEMLAAGLNANCG
GRDHIGIEVERQIVRWIAELFGFPATASGVFVTGSSMANFMALLVARTAAVGPQVREGGL
PGERLTAYASAAAHGCVVQAADLAGLGRGALRRIPFGKDHRIDLDALKRRIAEDRAAGCQ
PFLVTGSAGTVDVGAIDDLAALAELCLDEGLWFHVDGAYGSLGMLSGEIAPKLKGLSEAD
SIALDFHKWGQVNYDAGFLIVRDGEQHRDTFAAPAAYLRRETRGLAGGSPWPCDYGPDLS
RGFRALKTWFTLKTFGADRMGAMIANTCKIARDLETRVEREPELEMLAPVTLNIVCFRYR
AAPDVVDALNTEIVADLHESGIAAPSSTTIDGRLAIRAAIVNHRTTSADVDRMVDAVLRF
GKQRVGSSAFRW
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgcgatccgcgccggcgcgaatgccggcgcaaccagcctcgatcccgacgat
tgggacgcgctgcgcgccgacgcgcaccacatgctcgacgacatgctggactacatcgcc
ggggtgcgcgaccgcccggtgtggcagccgatcccgccaacggtccgcgccggcttcgcc
gaaccgctgccgcgccagggcacgccgctgccggaggtgtatcgccgcttcaccgaggag
atcgcgccctacgccaccggcaacgtccatcccggcttcatgggctgggtgcatggcggc
ggcaccgcggtcgggatgctggccgagatgctggcggccgggctcaacgccaattgcggc
ggccgcgaccatatcggcatcgaagtcgagcgccagatcgtgcgctggatcgccgagctg
ttcggctttcccgccaccgccagcggcgtgttcgtcaccggctcgtcgatggcgaatttc
atggcgctattggtggcgcgcaccgcggcggtcggtccgcaggtgcgcgagggcgggctg
ccgggcgaacggctcaccgcctacgcctcggccgcggcgcacggctgcgtggtgcaggcc
gccgatctcgccggcctcggccgcggcgcgctgcggcggattccattcggcaaggatcat
cgcatcgatctcgacgcgctgaagcgacggatcgcggaagatcgcgccgccggctgtcaa
ccgttcctggtgaccggctcggccggcaccgtcgatgtcggcgcgatcgacgatctcgcg
gcgcttgcagaactatgcctcgacgaagggctgtggtttcacgtcgacggtgcctacggc
tcgctcggcatgctgtccggcgaaattgcgccgaagctgaagggactgtcggaggcggat
tcgatcgccctcgacttccacaaatggggccaggtcaattacgacgccggcttcctgatc
gtgcgcgacggcgagcagcaccgcgacacgtttgcggcgccggccgcttacttgcgccgc
gagacccgcgggctggccggcggctcgccctggccgtgcgactacggtcccgatctgtcg
cgcggcttccgcgcactgaagacttggttcacgctgaagaccttcggcgccgaccgcatg
ggcgcgatgatcgccaacacctgcaagatcgcacgcgatctggaaacccgcgtcgagcgc
gagccggagctggagatgctggcaccggtgacgctgaacatcgtctgcttccgctatcgg
gcggctccggacgtggtggacgcgctcaacaccgagatcgtcgccgacctgcacgagtcg
ggaatcgccgcgccgtcctcgaccacgatcgacggcaggctcgcgatccgcgccgcgatc
gtcaatcatcgcacgacgtctgcggatgtcgaccggatggtggatgcggtgctgcggttc
gggaagcagcgggttgggtcgtcagctttccgctggtga
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