Rhodopseudomonas palustris DX-1: Rpdx1_4819
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Entry
Rpdx1_4819 CDS
T01381
Name
(GenBank) Ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00630
Glyoxylate and dicarboxylate metabolism
rpx00710
Carbon fixation in photosynthetic organisms
rpx01100
Metabolic pathways
rpx01110
Biosynthesis of secondary metabolites
rpx01120
Microbial metabolism in diverse environments
rpx01200
Carbon metabolism
Module
rpx_M00165
Reductive pentose phosphate cycle (Calvin cycle)
rpx_M00612
Anoxygenic photosynthesis in purple bacteria
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rpdx1_4819
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
Rpdx1_4819
Enzymes [BR:
rpx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Rpdx1_4819
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ADU46363
UniProt:
E6VEW0
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All DBs
Position
complement(5175457..5176842)
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AA seq
461 aa
AA seq
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MDQSNRYANLNLKESELIAGGRHVLCAYIMKPKAGFGNFIQTAAHFAAESSTGTNVEVST
TDDFTRGVDALVYEIDEAKSLMKIAYPIELFDRNVIDGRAMIASFLTLTIGNNQGMGDVE
YAKMYDFYVPPAYLKLFDGPSTTIKDLWRVLGRPVINGGFIVGTIIKPKLGLRPQPFANA
CYDFWLGGDFIKNDEPQGNQVFAPFKDTVRAVSEAMRRAQDKTGEAKLFSFNITADDHYE
MLARGEFILETFADNADHVAFLVDGYVAGPAAVTTARRAFPKQYLHYHRAGHGAVTSPQS
QRGYTAFVLSKMSRLQGASGIHVGTMGFGKMEGEASDRAAAFMITEDAADGPYFHQEWLG
MNPTTPIISGGMNALRMPGFFDNLGHSNLIMTAGGGAFGHVDGGAAGAKSLRQAEQCWKQ
GADPVEFAKDHREFARAFESFPQDADKLYPNWRAKLKPQAA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtcgaaccgctacgccaacctcaacctcaaagagagcgagctgatcgcgggc
ggacggcatgtgctgtgcgcctacatcatgaagccgaaggccggcttcggcaacttcatc
cagaccgccgcgcacttcgccgccgaatcctcgaccggcaccaacgtcgaagtctccacc
accgacgacttcacccgcggcgtcgacgcgctggtgtacgagatcgacgaggccaagagc
ctgatgaagatcgcgtacccgatcgagctgttcgatcgcaacgtgatcgatggccgggcc
atgatcgcctcgttcctcaccctgacgatcggcaacaaccagggcatgggcgacgtcgaa
tacgccaagatgtacgacttctacgtgccgccggcttacttgaagctgttcgacggcccg
tcgacgaccatcaaggatctgtggcgcgtgctcggtcggccggtgatcaacggcggcttc
atcgtcggcaccatcatcaagccgaagctcggcctgcgtccgcagccgttcgccaatgcc
tgctacgatttctggctgggcggcgacttcatcaagaacgacgagccgcagggcaaccag
gtgttcgcgccgttcaaggatacggtgcgtgccgtctccgaggcgatgcgccgggcgcag
gacaagaccggcgaggccaagctgttctcgttcaacatcaccgccgacgatcactacgag
atgctggcgcgcggcgagttcattctcgagaccttcgccgacaatgccgaccacgtcgcc
ttcctggtcgatggctacgtcgccggcccggcggcggtgaccaccgcacgccgcgcgttc
ccgaagcagtacctgcactatcatcgggccggccacggtgcggtgacctcgccgcaatcg
cagcgcggctacaccgccttcgttctgtccaagatgtcgcgactgcagggcgcctcgggc
atccatgtcggcaccatggggttcggcaagatggaaggtgaagcctccgatcgggccgcg
gccttcatgatcaccgaggatgcggccgacggtccgtacttccaccaggagtggctcggt
atgaacccgaccaccccgatcatctccggcggcatgaacgcgctgcggatgccgggcttc
ttcgacaatctcggccattccaacctgatcatgacggcgggcggcggtgcgttcggccac
gtcgatggcggcgcggcgggcgccaagtcgctgcgtcaggccgaacagtgctggaagcag
ggcgcagacccggtcgagttcgccaaggatcaccgcgaattcgcccgcgcgttcgagagc
ttcccgcaggacgccgacaagctgtatccgaactggcgcgccaagctgaagccgcaggcg
gcgtaa
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