Rhodospirillum rubrum F11: F11_12365
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Entry
F11_12365 CDS
T02006
Name
(GenBank) response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
rrf
Rhodospirillum rubrum F11
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
HATPase_c
PAS_4
Response_reg
PAS_3
PAS_8
HisKA
PAS_11
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
AEO48937
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Position
2802329..2806234
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AA seq
1301 aa
AA seq
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MIPSTTDDARPDLPSDQAERHPEGGADFEAIFRALPGPHLILDADLKIAAVNDAYLQATL
TRRGEILGRGIFEVFPDNPNDPVSEGVRNLRASLLRVLSSRTQDVMSIQKYDVRKPGGGA
GDFELRYWSPINTPVLGADGAVVYIVHYAQDLTEYYASSGQQDFAEGGKDDIVRQMEAEI
FQRSKEVAKSNLKLKEANSELAILYEKTRELDDIKTQFFANVSHELRTPLTLILGPVTSR
QEDPTLAPAEKRVLDMVARNARLLLRHVNDLLDIAKLEAGQMRMQYVRTDVTRLCRFALS
HFDSLAEERAIAFTLEAPAVLWAEIDPEKFRRVLLNLLSNAFKFTPNQGEITVSLIDRGD
DVILRVSDNGPGIPESMWTAVFERFRQVDGGSDRRHGGTGLGLAIVREFVDLHGGEVSIG
QASEGGAAFTVVLPKKAPPDVAVYPEIGDTLAEGPGFYRDIDKGLEGEDRLTDLAPSAAA
SGPASGPAGGVGINAPLVLVVEDNPDMNAFVSEIVAGHYRVISAFDGQEGLEKAHETLPD
LIISDVMMPRMSGETMADTLRQDGLTSDIPIIMLTAKADEAMRARMLRGVVQDYLFKPFS
RLELLARADGLIADHRRKQMVLRESEARFRATFEQAAVGIAHLDPDGHWLRVNHKLCDIV
GYPPDELLTLSFQDITHPDDLRADLRQMEALLAGQIDTYTIEKRYIRKTGESLWINLTVS
LVRDIHNAPAYFISVVENIQSRKEAELQLLLASAVFSNSMEGIFVTDLKGSILAVNPAFS
QITLYEAAEVLGRNARILQSGRQNREFYVALWQDVLTIGSWRGEIWNRRRDGEVFPEWLS
ISSVRNHQGEVTNYIGIFSDLSRIKHSEAKFHHLAHHDPLTGLPNRLLLRSRLDHAIERA
RRTGGRCAVLFLDLDRFKMINDSLGHRAGDTLLRTLGARLTACLGDTGTLARLGGDEFVA
VIEDIDGIPAVGTIALTMLERLREPCRLSEGPEVCIGGSVGISLFPEDGDNPDTLLQHAD
TALGQVKGAGGGAYGFYTRTLTERISARLGLEAGLRHALEQGDFLLHYQPLIALGTGEVE
GVEALVRWAGGDGLLIPPDRFIPLAEDTGLIVPLGEWVLGEACRTMQRWRSQGMPLTVLA
VNLSPRQFRDHAIPALVRRVLEQTGLPASVLELEITESAIMEQGAAAEAQMTGLKHLGVR
LAIDDFGTGYSSLANLRRFPIDKIKIDQSFVRDIPRDAAAEEITATIIAMGRTLKLHVLA
EGVETTDQLDFLSRKQCDSAQGYLFSRPITAAALEKWLALR
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgatcccttcgacgacagatgacgcgaggccggacctcccctcggatcaggcggagcgc
catcccgagggaggggccgatttcgaggcgattttcagggcgcttccgggcccccatctg
attctggacgcggacttgaagatcgccgccgtcaatgacgcctaccttcaggcgacgctg
acccgtcgcggcgagatccttggccggggcatattcgaggtctttcccgacaaccccaat
gatccggtcagcgagggcgtgcgcaatctgcgggcctcgctcctgcgcgtcctgtcaagc
cggacccaggatgtgatgtccattcagaagtatgacgtgcgcaagccgggcggcggggcg
ggcgacttcgagctgcgctattggagtccgatcaatacccccgtgcttggcgccgatggc
gcggtcgtctacatcgttcactatgcccaggatctaaccgaatactatgcttcctccggg
caacaggatttcgccgagggcgggaaggacgacatcgtccggcagatggaagcggaaatc
tttcagcgctccaaagaagtcgccaaatcaaacctgaaattgaaggaagccaattcagaa
ctggcgatcctttacgaaaaaacccgcgaactcgatgatatcaaaacccagttcttcgcc
aacgtcagccacgagctgcgcaccccgctgaccttgatcctcgggccggtcaccagccgt
caggaggacccgacgctcgccccggccgaaaagcgggtgcttgatatggtggcgcgcaat
gcccgactgctgctccgccacgtcaacgacctgcttgatatcgctaaactcgaagccggg
cagatgcggatgcaatatgtccgcaccgatgtgacccggctctgccgcttcgccctgtcg
cacttcgactcgttggccgaggaacgggccatcgccttcaccctggaggcgcccgccgtc
ctttgggccgagatcgatccggaaaagttccggcgggtcctgctcaaccttctgtccaac
gccttcaaattcacccccaaccagggggagatcaccgtgtcgctgatcgatcgcggcgat
gatgtgatcttgcgggtgagcgacaacgggccggggattcccgaaagcatgtggaccgcc
gtgttcgagcgcttccgccaagtcgatggcggcagcgaccgccgccatggcggaaccggg
cttggtctggccatcgtcagggaattcgtcgatctccacggcggcgaggtgagcatcggg
caggcctcggaaggcggggcggcgttcaccgtcgtcctgcccaaaaaggccccgcccgac
gtcgcggtctatcccgaaatcggcgacaccctggccgaaggcccggggttctatcgtgac
atcgataaggggcttgagggcgaggaccgcctgacggacctcgccccgtctgccgccgcc
agcgggcccgccagcgggcccgctggcggcgtcggcatcaacgccccgctcgttcttgtc
gtggaggacaaccccgacatgaacgcctttgtcagcgagatcgtcgctggacactatcgg
gtgatctcggccttcgacggccaggaggggctggagaaggcccacgaaaccctgcccgat
ctgatcatcagcgatgtcatgatgccaaggatgagcggcgagaccatggccgacaccctg
cgtcaggatggtctgaccagcgatattccgatcatcatgctcaccgccaaagccgatgag
gccatgcgcgcgcgcatgctgcgcggcgtggtgcaggactatctgttcaaaccgttttcc
cgcctggaactgctggcccgcgccgatgggctgatcgccgaccaccgccgcaagcagatg
gtattgcgcgagagcgaagcccgcttccgcgccaccttcgaacaagccgccgtcggcatc
gcccatctcgatcccgatggccattggctgcgggtgaaccacaagctctgcgatatcgtc
ggctatccccccgacgagttgctcacgctcagcttccaagacatcacccatcccgatgac
ctgcgggccgatcttcgccagatggaggccctgctcgccggccagatcgacacctatacc
atcgaaaagcgctacatccgcaaaacgggggaaagcctgtggatcaacctgaccgtctcc
ctggtgcgcgacatccataacgccccggcctatttcatctcggtggtcgaaaacatccaa
agccgcaaggaggccgaacttcagttgctgctggcctcggcggtgttttccaacagcatg
gaggggatcttcgtcaccgacctcaaaggttcgatcctggcggtcaatccggccttcagc
cagatcaccctctatgaagccgccgaggttctggggcgcaacgcccgcatcttgcaatcg
ggtcgccaaaaccgcgagttctatgtcgccttgtggcaagacgtcctgaccatcggatcc
tggcgcggggaaatctggaaccgccgccgcgatggcgaggttttccccgaatggctcagc
atcagctcggtgcgcaaccatcagggcgaagtcaccaattacatcggcattttctccgat
ctgtcgcggatcaagcattccgaagccaaattccaccacctcgcccaccacgatccgcta
accggcctgcctaaccgcctgctgttgcgcagccgcctcgatcacgcgatcgaacgggcg
cggcgcaccggcgggcggtgcgccgtgttgtttctcgaccttgaccgcttcaagatgatc
aacgacagcctgggtcaccgggcaggtgataccttgctgcgcaccctgggggcgcgcctg
accgcctgcctgggcgataccggcaccctcgcccgcctgggcggcgatgaattcgtcgcg
gtgattgaagacatcgatggcatcccggccgtcggcacgatcgccctcaccatgctcgag
cgcctgcgcgaaccctgccggttgagcgaaggccccgaggtttgcatcggcggcagcgtt
ggcatcagcctattccccgaagacggcgacaaccccgataccttgctccaacatgccgat
accgcgctgggccaggtcaaaggcgccggagggggggcttatggattttacacccggacc
ttgaccgaacggatctccgcccgccttggcctggaggccggattgcgccacgccttggaa
cagggggattttctcctccactaccaacccttgatcgcgctggggaccggcgaggtcgaa
ggggtggaggcgctggtccgctgggcgggcggcgacggcctgcttattccccccgaccgc
tttattcccctggccgaagacaccgggttgatcgttcccttgggcgaatgggtgctcggg
gaagcctgccgaaccatgcagcgctggcgcagccagggcatgcccctgacggtgctggcc
gtcaatctgtcaccccgccagttccgcgaccacgccattcccgccctggtccgccgggtc
cttgaacaaaccggcttgccggccagcgtccttgagctggaaatcaccgaaagcgccatc
atggaacaaggtgccgccgccgaggcccagatgaccgggcttaagcacttgggcgtgcgg
ctggcgatcgatgatttcggcaccggctattcgtcgctggccaacctccgccgcttcccc
atcgataagatcaagatcgaccaaagcttcgtgcgcgatatcccgcgcgatgccgccgcc
gaagagatcaccgcgacgatcatcgccatggggcgcacgctcaagctccatgtcctggcc
gaaggggtggaaaccaccgatcagcttgatttcctgtcgcgcaagcaatgcgacagcgcc
cagggctatctgttcagccggccgatcaccgccgccgccctggaaaagtggctcgcccta
cgctga
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