Rickettsia rickettsii Hino: RPJ_01875
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Entry
RPJ_01875 CDS
T01738
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rrn
Rickettsia rickettsii Hino
Pathway
rrn00470
D-Amino acid metabolism
rrn00550
Peptidoglycan biosynthesis
rrn01100
Metabolic pathways
rrn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rrn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RPJ_01875 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RPJ_01875 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RPJ_01875 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rrn01011
]
RPJ_01875 (ddl)
Enzymes [BR:
rrn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RPJ_01875 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rrn01011
]
Precursor biosynthesis
Amino acid ligase
RPJ_01875 (ddl)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
CPSase_L_D2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AFB27316
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All DBs
Position
338525..339490
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AA seq
321 aa
AA seq
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MHKYQTHWVEHSIVKILSSTGKKHIALMAGGMSAEREVSLVSSEGVSKALIELGYRVTFI
DMGADIAVRLQEIKPDIVFNCLHGTYGEDGGLPGLLNIMRIPYTHSGVLSSALAFDKIHS
RIWFLTNNINMAESIVVNKSDNIKNDPMKRPYVIKPLTQGSSIGVEVIFAEDDFNFADYD
FPYGDQVIIEQYIKGRELQVAVLNGKALGALEIKLLKNRFYDYETKYTAGFADHLCPAPL
PANLYEKLLIESEKIYKTMNCKGPARAEFILEEQTNKLYALEINTHPGMMSLSIVPEIAA
YAGINFTNLIEEIIKTASFES
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgcataaatatcaaacacattgggtagaacactctatagtcaaaatattaagtagtacc
ggtaaaaagcatatagcattaatggcaggcggtatgtctgctgagcgtgaagtatcgtta
gtgtcaagtgaaggagttagtaaagctttaattgaattaggatatagagttacctttatt
gatatgggagcggatattgccgttagattacaagaaataaaacctgatatcgtgtttaat
tgcctgcacggtacatatggtgaagacggtggtttaccaggattacttaatataatgcgg
attccttatactcatagcggcgtgttatcttcagctttagcattcgataaaatacattct
aggatctggtttttaacgaataatattaatatggcagaaagcattgttgtaaataaaagc
gataatataaaaaatgatcctatgaaacgaccgtacgttattaagcctcttacgcaaggt
tcaagtattggtgttgaggtgatatttgcagaagacgattttaactttgccgattatgat
tttccttacggtgatcaggtaataatagaacaatatataaaagggcgagaattgcaagta
gcggtattaaacggcaaagctcttggagctttagagattaaattactaaagaatcgtttc
tatgattatgaaactaaatataccgcaggatttgctgatcatctttgtcctgctccgcta
cctgctaatttatatgagaaattacttatagaatcagaaaaaatttataaaacaatgaat
tgtaaaggtcctgctagagcagagtttattttagaagagcagacaaacaagttatatgct
ttggagataaatactcacccaggtatgatgtctttatcaatagtgccggaaattgcagct
tatgcagggataaattttactaacttaattgaagaaattataaagacggcaagctttgaa
tcatga
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