Rhinopithecus roxellana (golden snub-nosed monkey): 104660656
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Entry
104660656 CDS
T03989
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X2
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04613
Neutrophil extracellular trap formation
rro05014
Amyotrophic lateral sclerosis
rro05034
Alcoholism
rro05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
104660656 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
104660656 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
104660656 (HDAC6)
09165 Substance dependence
05034 Alcoholism
104660656 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rro01009
]
104660656 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rro03019
]
104660656 (HDAC6)
04131 Membrane trafficking [BR:
rro04131
]
104660656 (HDAC6)
03036 Chromosome and associated proteins [BR:
rro03036
]
104660656 (HDAC6)
Enzymes [BR:
rro01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104660656 (HDAC6)
Protein phosphatases and associated proteins [BR:
rro01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104660656 (HDAC6)
Messenger RNA biogenesis [BR:
rro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
104660656 (HDAC6)
Membrane trafficking [BR:
rro04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104660656 (HDAC6)
Chromosome and associated proteins [BR:
rro03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
104660656 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
104660656
NCBI-ProteinID:
XP_010359388
UniProt:
A0A2K6RIS1
LinkDB
All DBs
Position
7:21256932..21280723
Genome browser
AA seq
1215 aa
AA seq
DB search
MTSTGQDSTTTRQRRSRQNPQSPTQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLG
QAMEEDLIAGLQGMDLNLEAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELHVLADTYDSVYLHPNS
YSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSA
QASVSCALEALEPFWEVLVRSTETVEGDNMEEDNVEENEEEGPWEPPVLPILTWPVLQSR
TGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCHTLTPRPATEAELLTCH
SAEYVGHLRATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACCLVEAVLSGEVLN
GAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGRALRILIVDWDVHHGNGTQHMF
EDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWH
RLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEG
GYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQVHRRYWRSLRVMKVE
DREGPSSSKLVTKKAPQPAKPRLAERMTTREKKVLEAGMGTITSASFGEESTPGQTKSET
AVVALTQDQSSEAATGGATLAQTISEAAVGGAMLGQTTSEEAVGGATPDQTTSEKTVGGA
TLDQTTSEDAVGGATLGQTTSEEAVGGATLAQTTSEAAMEGATLDQTTSEEAPGGTELIQ
TPLASSTDHQTPPTSPVQGTTPQISPSTLIGSLRTLELGSESQGASESQAPGEENLLGEA
AGGQDMADSMLMQGSRGLTDQAIFYAVTPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTMQ
ENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDVKN
IAHQNKFGEDMPHPH
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaaccggccaggattctaccacaaccaggcagcgaagaagtaggcagaacccc
caatctcccactcaggactccagtgtcacttcgaagcgaaacattaaaaagggagccgtt
ccccgctccatccccaatctagcggaggtaaagaagaaaggcaaaatgaagaagctcggc
caagcaatggaagaagacctaatcgcgggactgcaagggatggatctgaaccttgaggct
gaagcactggctgggactggcttggtgttggatgagcagctaaatgaattccattgcctc
tgggatgacagcttcccagaaggccctgagcggctccatgccatcaaagagcaactgatc
caggagggcctcctagatcgctgtgtgtcctttcaggcccggtttgctgaaaaggaagag
ctgatgttggttcacagcctagaatatattgatctgatggaaacaactcagtacatgaat
gagggagaactccacgtcctagcagacacttacgactcagtttatctgcatccgaactca
tactcctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcggtcctgggg
gctgagatccggaatggcatggccatcattaggcctcctggacatcacgcccagcacagt
cttatggatggctattgcatgttcaaccacgtggctgtggcagcccgctatgctcaacag
aaacaccgcatccggagggtccttatcgtagattgggatgtgcaccacggtcaaggaaca
cagttcaccttcgaccaggaccccagtgtcctctatttctccatccaccgctatgagcag
ggtaggttctggccccacctgaaggcctctaactggtccaccacaggtttcggccaaggc
caaggatataccatcaatgtgccttggaaccaggtggggatgcgggatgctgactacatt
gctgctttcttgcacgtcctgctgccagtcgccctcgagttccagcctcagctggtcctg
gtggctgctggatttgatgccctgcaaggggaccccaagggtgagatggccgccactccg
gcagggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctgatcctg
tctctggagggtggctacaacctccgcgccctggctgaaggtgtcagtgcttcgctccac
acccttctgggagacccttgccccatgctggagtcacctggtgccccctgccggagtgcc
caggcttcagtctcctgtgctctggaagcccttgagcccttctgggaggttcttgtgaga
tcaactgagaccgtggagggggacaacatggaggaggacaatgtagaggagaatgaggag
gaaggaccctgggagccccctgtgctcccaatcctgacgtggccagtgctacagtctcgc
acagggctggtctatgaccaaagtatgatgaatcactgcaacttgtgggacagccaccac
cctgaggtaccacagcgcatcttgcggatcatgtgccgtctggaggagctgggccttgct
gggcgctgccacaccctgacaccgcgccccgccacagaggctgagctgctcacctgccac
agtgctgagtacgtgggtcatctccgggccacagagaaaatgaaaacccgggagctgcac
cgtgagagttccaactttgactccatctacatctgccccagtaccttcgcctgtgcacag
cttgccactggcgctgcctgctgcctggtggaggctgtgctctcgggagaggttctgaat
ggtgctgctgtggtgcgtcccccaggacaccacgcggagcaggatgcagcttgcggtttt
tgctttttcaactccgtggctgtggctgctcgccatgcccaggctatcagtgggcgtgcc
ctgcggatcctgattgtggattgggatgtccaccatggtaatggaactcagcacatgttt
gaggatgaccccagtgtgctatatgtgtccctgcaccgctatgatcatggcaccttcttc
cccatgggggatgagggtgccagcagtcagatcggccgggctgccggcacaggcttcacc
gtcaacgtggcatggaacgggccccgcatgggtgacgctgactacctagctgcctggcat
cgcctggtgcttcccattgcctacgagtttaacccagaactggtgctggtctcagctggc
tttgatgctgcacggggggacccgctggggggctgccaggtgtcacctgagggttatgcc
cacctcacccacctgctgatgggccttgccagtggccgcattatccttatcctagagggt
ggctataacctgacatccatctcagagtccatggctgcctgcactcgctccctccttgga
gacccgccacccctgctgaccctgccacggccccctctatcaggggccctggcctcaatc
actgagactatccaagtccatcgcagatactggcgcagcttacgggtcatgaaggtagaa
gacagagagggaccctccagttctaagttggtcaccaagaaggcaccccaaccagccaaa
cctaggttagctgagcggatgaccacacgagaaaagaaggttctggaagcaggcatggga
acgatcacctcggcatcatttggggaagagtccactccaggccagactaagtcagagaca
gctgtggtggccctcactcaggaccagtcctcagaggcagccacagggggagccacactg
gcccagaccatctctgaggcagccgttgggggagccatgctgggccagaccacctcagag
gaggctgtcgggggagccactccggaccagaccacctcagagaagactgtgggaggagcc
actctggaccagaccacctcagaggatgctgttgggggagccacgctgggccagactacc
tcagaggaggctgtaggaggagctacactggcccagaccacctcggaggcagccatggag
ggagccacactggaccagactacgtcagaggaggctccagggggcaccgagctgatccaa
actcctctagcctcgagcacagaccaccagacccccccaacctcacctgtgcagggaact
acaccccagatatctcccagtacactgattgggagtctcaggaccttggagctaggcagc
gaatctcagggggcctcagaatctcaggccccaggagaggagaacctactaggagaggca
gctggaggtcaggacatggctgattcgatgctgatgcagggatctaggggcctcactgat
caggccatattttatgctgtgacaccactgccctggtgtccccatttggtggcagtatgc
cccatacctgcagcaggcctagacgtgacccaaccttgtggggactgtggaacaatgcaa
gagaattgggtgtgtctctcttgctatcaggtctactgtggtcgttacatcaatggccac
atgctccaacaccatggaaattctggacacccgttggtcctcagctacatcgacctgtca
gcctggtgttactactgtcaggcctatgtccaccaccaggctctcctagatgtgaagaac
atcgcccaccagaacaagtttggggaggatatgccccacccacactaa
DBGET
integrated database retrieval system
