KEGG   Rhinopithecus roxellana (golden snub-nosed monkey): 104660656Help
Entry
104660656         CDS       T03989                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  
histone deacetylase 6 [EC:3.5.1.98]
Organism
rro  Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
Alcoholism
Human papillomavirus infection
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rro00001]
 Human Diseases
  Cancers
   05203 Viral carcinogenesis
    104660656 (HDAC6)
  Substance dependence
   05034 Alcoholism
    104660656 (HDAC6)
  Infectious diseases
   05165 Human papillomavirus infection
    104660656 (HDAC6)
Enzymes [BR:rro01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104660656 (HDAC6)
Protein phosphatases and associated proteins [BR:rro01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104660656 (HDAC6)
Messenger RNA biogenesis [BR:rro03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     104660656 (HDAC6)
Membrane trafficking [BR:rro04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    104660656 (HDAC6)
Chromosome [BR:rro03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     104660656 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 1215 aa AA seqDB search
MTSTGQDSTTTRQRRSRQNPQSPTQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLG
QAMEEDLIAGLQGMDLNLEAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELHVLADTYDSVYLHPNS
YSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSA
QASVSCALEALEPFWEVLVRSTETVEGDNMEEDNVEENEEEGPWEPPVLPILTWPVLQSR
TGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCHTLTPRPATEAELLTCH
SAEYVGHLRATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACCLVEAVLSGEVLN
GAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGRALRILIVDWDVHHGNGTQHMF
EDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWH
RLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEG
GYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQVHRRYWRSLRVMKVE
DREGPSSSKLVTKKAPQPAKPRLAERMTTREKKVLEAGMGTITSASFGEESTPGQTKSET
AVVALTQDQSSEAATGGATLAQTISEAAVGGAMLGQTTSEEAVGGATPDQTTSEKTVGGA
TLDQTTSEDAVGGATLGQTTSEEAVGGATLAQTTSEAAMEGATLDQTTSEEAPGGTELIQ
TPLASSTDHQTPPTSPVQGTTPQISPSTLIGSLRTLELGSESQGASESQAPGEENLLGEA
AGGQDMADSMLMQGSRGLTDQAIFYAVTPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTMQ
ENWVCLSCYQVYCGRYINGHMLQHHGNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDVKN
IAHQNKFGEDMPHPH
NT seq 3648 nt NT seq  +upstreamnt  +downstreamnt
atgacctcaaccggccaggattctaccacaaccaggcagcgaagaagtaggcagaacccc
caatctcccactcaggactccagtgtcacttcgaagcgaaacattaaaaagggagccgtt
ccccgctccatccccaatctagcggaggtaaagaagaaaggcaaaatgaagaagctcggc
caagcaatggaagaagacctaatcgcgggactgcaagggatggatctgaaccttgaggct
gaagcactggctgggactggcttggtgttggatgagcagctaaatgaattccattgcctc
tgggatgacagcttcccagaaggccctgagcggctccatgccatcaaagagcaactgatc
caggagggcctcctagatcgctgtgtgtcctttcaggcccggtttgctgaaaaggaagag
ctgatgttggttcacagcctagaatatattgatctgatggaaacaactcagtacatgaat
gagggagaactccacgtcctagcagacacttacgactcagtttatctgcatccgaactca
tactcctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcggtcctgggg
gctgagatccggaatggcatggccatcattaggcctcctggacatcacgcccagcacagt
cttatggatggctattgcatgttcaaccacgtggctgtggcagcccgctatgctcaacag
aaacaccgcatccggagggtccttatcgtagattgggatgtgcaccacggtcaaggaaca
cagttcaccttcgaccaggaccccagtgtcctctatttctccatccaccgctatgagcag
ggtaggttctggccccacctgaaggcctctaactggtccaccacaggtttcggccaaggc
caaggatataccatcaatgtgccttggaaccaggtggggatgcgggatgctgactacatt
gctgctttcttgcacgtcctgctgccagtcgccctcgagttccagcctcagctggtcctg
gtggctgctggatttgatgccctgcaaggggaccccaagggtgagatggccgccactccg
gcagggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctgatcctg
tctctggagggtggctacaacctccgcgccctggctgaaggtgtcagtgcttcgctccac
acccttctgggagacccttgccccatgctggagtcacctggtgccccctgccggagtgcc
caggcttcagtctcctgtgctctggaagcccttgagcccttctgggaggttcttgtgaga
tcaactgagaccgtggagggggacaacatggaggaggacaatgtagaggagaatgaggag
gaaggaccctgggagccccctgtgctcccaatcctgacgtggccagtgctacagtctcgc
acagggctggtctatgaccaaagtatgatgaatcactgcaacttgtgggacagccaccac
cctgaggtaccacagcgcatcttgcggatcatgtgccgtctggaggagctgggccttgct
gggcgctgccacaccctgacaccgcgccccgccacagaggctgagctgctcacctgccac
agtgctgagtacgtgggtcatctccgggccacagagaaaatgaaaacccgggagctgcac
cgtgagagttccaactttgactccatctacatctgccccagtaccttcgcctgtgcacag
cttgccactggcgctgcctgctgcctggtggaggctgtgctctcgggagaggttctgaat
ggtgctgctgtggtgcgtcccccaggacaccacgcggagcaggatgcagcttgcggtttt
tgctttttcaactccgtggctgtggctgctcgccatgcccaggctatcagtgggcgtgcc
ctgcggatcctgattgtggattgggatgtccaccatggtaatggaactcagcacatgttt
gaggatgaccccagtgtgctatatgtgtccctgcaccgctatgatcatggcaccttcttc
cccatgggggatgagggtgccagcagtcagatcggccgggctgccggcacaggcttcacc
gtcaacgtggcatggaacgggccccgcatgggtgacgctgactacctagctgcctggcat
cgcctggtgcttcccattgcctacgagtttaacccagaactggtgctggtctcagctggc
tttgatgctgcacggggggacccgctggggggctgccaggtgtcacctgagggttatgcc
cacctcacccacctgctgatgggccttgccagtggccgcattatccttatcctagagggt
ggctataacctgacatccatctcagagtccatggctgcctgcactcgctccctccttgga
gacccgccacccctgctgaccctgccacggccccctctatcaggggccctggcctcaatc
actgagactatccaagtccatcgcagatactggcgcagcttacgggtcatgaaggtagaa
gacagagagggaccctccagttctaagttggtcaccaagaaggcaccccaaccagccaaa
cctaggttagctgagcggatgaccacacgagaaaagaaggttctggaagcaggcatggga
acgatcacctcggcatcatttggggaagagtccactccaggccagactaagtcagagaca
gctgtggtggccctcactcaggaccagtcctcagaggcagccacagggggagccacactg
gcccagaccatctctgaggcagccgttgggggagccatgctgggccagaccacctcagag
gaggctgtcgggggagccactccggaccagaccacctcagagaagactgtgggaggagcc
actctggaccagaccacctcagaggatgctgttgggggagccacgctgggccagactacc
tcagaggaggctgtaggaggagctacactggcccagaccacctcggaggcagccatggag
ggagccacactggaccagactacgtcagaggaggctccagggggcaccgagctgatccaa
actcctctagcctcgagcacagaccaccagacccccccaacctcacctgtgcagggaact
acaccccagatatctcccagtacactgattgggagtctcaggaccttggagctaggcagc
gaatctcagggggcctcagaatctcaggccccaggagaggagaacctactaggagaggca
gctggaggtcaggacatggctgattcgatgctgatgcagggatctaggggcctcactgat
caggccatattttatgctgtgacaccactgccctggtgtccccatttggtggcagtatgc
cccatacctgcagcaggcctagacgtgacccaaccttgtggggactgtggaacaatgcaa
gagaattgggtgtgtctctcttgctatcaggtctactgtggtcgttacatcaatggccac
atgctccaacaccatggaaattctggacacccgttggtcctcagctacatcgacctgtca
gcctggtgttactactgtcaggcctatgtccaccaccaggctctcctagatgtgaagaac
atcgcccaccagaacaagtttggggaggatatgccccacccacactaa

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