Rhinopithecus roxellana (golden snub-nosed monkey): 104666944
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Entry
104666944 CDS
T03989
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03008
Ribosome biogenesis in eukaryotes
rro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104666944 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
104666944 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rro03021
]
104666944 (XRN2)
03019 Messenger RNA biogenesis [BR:
rro03019
]
104666944 (XRN2)
03009 Ribosome biogenesis [BR:
rro03009
]
104666944 (XRN2)
03016 Transfer RNA biogenesis [BR:
rro03016
]
104666944 (XRN2)
Transcription machinery [BR:
rro03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104666944 (XRN2)
Messenger RNA biogenesis [BR:
rro03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
104666944 (XRN2)
Ribosome biogenesis [BR:
rro03009
]
Eukaryotic type
Pre-60S particles
RNases
104666944 (XRN2)
Transfer RNA biogenesis [BR:
rro03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
104666944 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
104666944
NCBI-ProteinID:
XP_010367404
LinkDB
All DBs
Position
13:complement(81846962..81937670)
Genome browser
AA seq
1051 aa
AA seq
DB search
MSPRDSDALSFALRGWDHRGRAAAFATQSAAGPRLRQAARPGPFPPLPRPAEPPSHSGGA
VTSPPVSGAHVGGSAGALSRRSRLFGYARQPAGRRLQPCAAMGVPAFFRWLSRKYPSIIV
NCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMV
AIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEI
LAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS
APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNK
PKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTM
ASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKTGGYLT
ESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKEKRKRMKRDQPAFTPSGILT
PHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNTSFTSDGSPSPIGGIKRKAEDS
DSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLCWVLRYYYQGCAS
WKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFLPPSWRKLMS
DPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETRRNSL
GGDVLFVGKHHPLHDFILELYQTGSTEPVDVPPELCHGIQGKFSLDEEAILPDQIVCSPV
PMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAVLKPSDWEKSSNGRQWKPQL
GFNRDRRPVHLDQAAFRTLGHVMPRGSGTGIYSNAAPPPATYQGNLYRPLLRGQAQIPKL
MSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQNAAFQPNQYQMLAGPGGYP
PRRDDRGGRQGYPREGRKYPLPPPSGRYNWN
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgagcccccgcgactcagacgcgctcagcttcgcgctccgtggctgggaccaccgaggg
cgagctgcagccttcgccacccagtccgctgccggaccccgcctccgacaagcagcccgg
ccaggcccttttccgccgctccctcgcccagccgagcctccttcccacagcggcggcgcc
gtgacgtcacctccggtctcaggggcgcacgtgggaggaagtgctggtgccctcagccgc
cgctcccgtctctttggttacgctcgtcagcccgccggccgccgcctccagccgtgtgca
gctatgggagtcccggcgttcttccgctggctcagccgcaagtacccgtccatcatagtc
aactgcgtggaagagaagccaaaagaatgcaatggtgtaaagattccagttgatgccagt
aaacctaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatc
catccctgtactcatcctgaagacaaaccagcaccaaaaaatgaagatgaaatgatggtt
gcaatttttgagtacattgacagacttttcagtattgtaagaccaagacgacttctctac
atggcaatagatggagtggcaccacgtgccaaaatgaaccagcagcgttcaaggaggttc
agagcatcaaaagaaggaatggaagcagcagtcgagaagcagcgagtcagggaagaaata
ttggcaaaaggtggctttcttcctccagaagaaataaaagaaagatttgacagcaactgt
attacaccaggaactgaattcatggacaatcttgctaaatgccttcgctattacatagct
gatcgtttaaataatgaccctgggtggaaaaatttgacagttattttatctgatgctagt
gctcctggtgaaggagaacataaaatcatggattacattagaaggcaaagagcccagcct
aaccatgacccaaatactcatcattgtttatgtggagcagatgctgatctcattatgctt
ggccttgccacacatgaacccaactttaccattattagagaagaattcaaaccaaacaag
cccaaaccatgtggtctttgtaatcagtttggacatgaggtcaaagattgtgaaggtttg
ccaagagaaaagaagggaaagcatgatgaacttgccgatagtcttccttgtgcagaagga
gagtttatcttccttcggcttaatgttcttcgtgagtatttggaaagagaactcaccatg
gccagcctaccattcacatttgatgttgagaggagcattgatgactgggttttcatgtgc
ttctttgtgggaaatgacttcctccctcatttgccgtcgttagagattagggaaaatgca
attgaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttaca
gaaagtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagtt
gaggatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaa
gaaaaaagaaagagaatgaagagagatcaaccagctttcactcctagtggaatattaact
cctcatgccttgggttcaagaaattcaccaggttctcaagtagccagtaatccgagacaa
gcagcctatgaaatgaggatgcagaataactctagtccttcaatatctcctaatacgagt
ttcacatctgatggctccccgtctccaataggaggaattaagcgaaaagcagaagacagt
gacagtgaacctgagccagaggataacgtcaggttatgggaagctggctggaagcagcgg
tactacaagaacaaatttgatgtggatgcagctgatgagaaattccgtcggaaagttgtg
cagtcgtacgttgaaggactttgctgggttcttagatattattaccagggctgtgcttcc
tggaagtggtattatccatttcattatgcaccatttgcttcagactttgaaggcattgca
gacatgccatctgattttgagaagggtacaaaaccgtttaaaccactggaacaacttatg
ggagtttttccagctgcaagtggtaattttctacctccatcatggcggaagctcatgagt
gatcctgattctagtataattgacttctatcctgaagattttgctattgatttgaatggg
aagaaatatgcatggcaaggtgttgctctcttgccattcgtggatgagcgaaggctacga
gctgccctagaagaggtatacccagacctcactccagaagagaccagaagaaacagcctt
ggaggtgatgtcttatttgtggggaaacatcacccactccatgacttcattttagagctg
taccagacaggttccacagagccagtggatgtaccccctgaactatgtcatgggattcaa
ggaaagttttctttggatgaagaagccattcttccagatcaaatagtatgttctcctgtt
cctatgttaagggatctgacacagaacactgtagtcagtattaattttaaagacccacag
tttgctgaagattacatttttaaagctgtaatgcttccaggagcaagaaaaccagcagca
gtactgaaacctagtgactgggaaaaatccagcaatggacggcagtggaagcctcagctt
ggctttaaccgtgaccggaggcctgtgcacctggatcaggcagccttcaggactttgggc
catgttatgccaagaggctcaggaactggcatttacagcaatgctgcaccaccacctgcg
acttaccagggaaacttatacaggccgcttttgagaggacaagcccagattccaaaactt
atgtcaaatatgaggccccaggattcctggcgaggtcctcctccccttttccagcagcaa
aggtttgacagaggcgttggggctgaacccctgctcccatggaaccggatgctgcaaacc
cagaatgcagccttccagccaaaccagtaccagatgctagctgggcctggtgggtatcca
cccagacgagatgatcgtggagggagacagggatatcccagagaaggaaggaaataccct
ttgccaccaccctcaggaagatacaattggaattaa
DBGET
integrated database retrieval system
