Rhizobium rosettiformans: D4A92_20095
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Entry
D4A92_20095 CDS
T08393
Name
(GenBank) DUF4130 domain-containing protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rros
Rhizobium rosettiformans
Pathway
rros03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D4A92_20095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rros03400
]
D4A92_20095
Enzymes [BR:
rros01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
D4A92_20095
DNA repair and recombination proteins [BR:
rros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D4A92_20095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QRF53589
LinkDB
All DBs
Position
complement(4092132..4093592)
Genome browser
AA seq
486 aa
AA seq
DB search
MRTVTLEGRGAFDEWRDAARSLLAGRVTPDQVRWQLSGEGGDLFGALLPEKTPVEAPSGT
VVPKGFIEAAEAAICHSDPDRFPLLYRILWRLQAERALLQVRSDPDVADLVRLIKNVRRD
SHKMKAFVRFREVEAVQAKRRRFVAWFEPEHFIVARTAGFFQRRFTDMDWLIATPKGSAA
WNGQELKTSREPAARPEAEDETDELWRTYFANIFNPARVKIRAMQSEMPKKYWKNMPEAS
LIPDLIAGAERRVQEMAAREASQPPAFHERLQAQWRGREDEGASVDLPPLERVRQEAAGC
TRCPLHCHATQTVFGEGPKDSEIMFVGEQPGDTEDLAGKPFIGPAGQVFDEAVAAAGINR
SQVYVTNAVKHFKYERRGKRRIHMRPDAGEVAHCRWWVAKEIEIIRPRIVVALGATAYLS
LTGESRPIAEVRGMPIPMQDNRMLLVTTHPSAILRMPDPDLKARSLAAFRSDLADVKRLH
ETLAAS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccgtgacgctcgaagggcgaggagcgttcgacgagtggcgcgatgctgcacgt
tcgctcctggctggtcgggtgacacccgatcaggttcgctggcagctttcgggcgagggg
ggcgatctgttcggcgcgttgcttccagagaaaactcctgtcgaggcaccctccgggacc
gtcgtgccgaagggcttcatcgaggcggcggaggcggcgatctgccattcggatccggat
cgatttccacttctctatcgcatcctttggcggctgcaggcggaaagggcgctgctgcag
gtgcgatcggatcccgatgtcgccgacctcgttcgcctgatcaagaatgtccggcgcgac
agccacaagatgaaggcattcgtgcggttccgcgaggtggaagctgtccaggcgaaacgg
cggcgcttcgtggcctggttcgagccggagcatttcatcgtcgcgcgcaccgccggcttc
ttccagcggcgcttcaccgatatggactggctgatcgcgacgccaaagggctctgccgcc
tggaacgggcaggagttgaagacctcgcgcgagccagccgcccgacctgaagcggaagac
gagaccgacgagctgtggcggacctatttcgccaatatcttcaatccggcgcgggtgaag
atcagggccatgcagtcggaaatgccgaagaaatactggaagaacatgccggaggcctcg
ctcattccggacttgattgcgggagccgagcggcgggttcaggaaatggcagcgcgcgag
gcaagccagccgccggcctttcacgagcgactgcaggcgcagtggcggggacgagaagac
gagggggcatcggttgatctgccgccgctcgaacgggtgcgccaggaggcagccggttgc
acgcgttgccctctgcattgccatgcgacacagacggtgttcggcgaggggccgaaggat
tcggagatcatgttcgtcggcgagcagccgggcgacaccgaggatctggcgggcaagcca
ttcatcggcccggccggccaggtcttcgatgaggccgtggcggcggcagggatcaaccgg
tcgcaggtttacgtcacaaatgcagttaaacatttcaaatacgagcggcgcggcaagcga
cgtatccatatgcggcccgatgccggagaagtcgcgcattgccgctggtgggtggccaag
gagatcgagatcatccggccgcgcatcgtcgttgcgctgggggcgaccgcctatctgtcc
ctgacgggcgaaagccggccgatcgccgaggtgcgaggcatgccgatcccgatgcaggac
aaccgcatgctgctcgtgacgacgcatccgtcggcgatcctcaggatgccggatccggat
ctgaaggcacgaagccttgcggccttccgatcggaccttgcagacgtcaagcggctgcat
gagacactggctgcgtcctga
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