Roseiflexus sp. RS-1: RoseRS_2981
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Entry
RoseRS_2981 CDS
T00542
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
rrs
Roseiflexus sp. RS-1
Pathway
rrs00300
Lysine biosynthesis
rrs00470
D-Amino acid metabolism
rrs00550
Peptidoglycan biosynthesis
rrs01100
Metabolic pathways
rrs01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rrs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RoseRS_2981
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RoseRS_2981
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RoseRS_2981
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RoseRS_2981
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rrs01011
]
RoseRS_2981
Enzymes [BR:
rrs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
RoseRS_2981
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
RoseRS_2981
Peptidoglycan biosynthesis and degradation proteins [BR:
rrs01011
]
Precursor biosynthesis
Amino acid ligase
RoseRS_2981
Racemase
RoseRS_2981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ABQ91345
UniProt:
A5UXJ2
LinkDB
All DBs
Position
complement(3732589..3735123)
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AA seq
844 aa
AA seq
DB search
MIDLDDLLAAGGRLASPVYARQFSGFSYDSRLTAAGELFLALRTPRGDGHAYIADALAAG
ATGVICEKPPADLSNTTMIVTDDPALLAARWAAARLRQVAPRVIGVTGSVGKTSATRAIA
AVLSGLAPTFRSRRSFNSLIGLPVSLARLQDDHRFAVLEYGTAYPGELHRLTALFPPHVA
VVTSAAPMRLSAFGSVADLVREYGALVAALPVDGWAVVNGDDPALAGLCDTTRARVLTFG
TGASCDLRGEAPQYALNGTRMRVCYRGESVDTVIPLIGEPAVGAALAAVGVALVCGMTLE
RAAERLALVEPPAGRLRPHLARSSAIVIDDTVGAEPSAMLAALRTLAILPAQRRIAVLGD
LPADSSIPGEQNDTYAAIGRLAARTADLLIWKGDAGTHVMRAVQRVRTGMSATLVHTIAG
ALEALPPDLGAGDLVLVCGGATARLERLVAALIDPSVNASQALVRQDAGWRATRIADPDR
PTWVRIDLDAIRDNVRTLRSIAGVPVMAVLKADAYGHGAVRAARAALAGGAVALAVATLG
EARTLREAGIGAPILALGYTPPWQVAQAARLGVAITVFDYDAARACAAVAETGVPVPVHV
EVDTGMARTGLSVDELGPFLRSLAGLPGVHVEGLYTHFADADAADPGAAEAQLRRFRSAL
DAVTGAGLRPPVVHAANSAAMLRLPGARFDMVRPGIACYGLAPSPWVTLPAALRPALSFH
SEVAQVRDLPPGTPVSYGGTFVTRRHSRIATIPVGYADGMRRAPPWREVLVRGRRAPVVG
RICMDYAMIDVTDHAEVRRGDLVTLIGVQGDACITVAEVASWLGTISYDVVATILPRVPR
EVSE
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatctggacgatcttcttgcggcaggcgggcgactggcgtcaccggtgtatgcg
cgtcagttcagcggcttctcgtatgactcgcggttgaccgctgcgggggaactgttcctg
gcgctgcgcacgccgcgcggcgatggtcatgcctatattgccgatgcgctggcggctggc
gccactggcgtgatctgtgagaagccgcccgccgatctgtccaataccaccatgatcgtc
acagatgatccggcgctccttgcagcgcgctgggcagcagcgcggttgcgacaggttgcg
ccacgggtcatcggcgtgaccggcagtgtcggcaagacgtcggcgacccgcgcgattgct
gctgtgctttccggtcttgcgccgacctttcgcagtcgtcgcagtttcaattcgctgatc
gggctgccggtctcgcttgcgcggctccaggacgatcaccgctttgcggtgctggaatac
ggcacggcgtatcctggcgagttgcaccgtctgacggcgctctttccgccgcacgtcgcg
gttgtcacgtctgccgctccgatgcgactatcggcatttggatcggttgcggatctggtg
cgtgagtatggcgcactggtcgctgcgcttcccgtcgatggatgggcagtggtgaacggt
gacgatcctgcgctcgccgggctgtgcgacacgacccgcgccagggtgctgacgtttgga
accggcgcatcctgcgatttgcgcggagaggcgccgcagtatgcactcaacgggacgcgc
atgcgggtgtgttatcgcggcgagtcagtcgatacggtcattccgctgatcggtgaaccg
gcggttggcgcggcgctggctgctgtcggagtggcgcttgtctgcgggatgacgctggag
cgcgccgccgaacggctggcgctggtcgagccgccagccggacgtctccgtccacatctg
gcgcgcagcagcgcgatcgtgatcgatgatacagttggcgctgaaccatcggcgatgttg
gcggcgttgcgaacgctggcgatccttccggcgcaacggcgaatcgcagtgctcggcgat
cttcctgccgacagttccatccccggtgagcagaacgatacgtatgcggcgatcggaagg
cttgcggcgcgcactgccgatctgttgatctggaagggggatgccggaacgcacgtcatg
cgcgccgtgcagcgggtgcgtactggtatgtcggcgacgctcgtgcatacgattgccggt
gcgctcgaagccttgccgcctgatctgggggcaggtgatctggtgctggtctgtggcggt
gcaacggcgcgcctggagcgcctggtcgctgcgctgatcgatccgtcggtgaatgcctcg
caggcgctggtgcgtcaggatgccggatggcgcgccacgcgcatcgccgatcccgaccgc
ccgacgtgggtgcggatcgatctggatgcgatccgcgacaatgtgcggactttgcgttca
attgctggcgtgcccgtgatggcggtgctcaaggcggatgcgtatggtcatggtgcggtg
cgtgcggcgcgcgcggcgctggctggcggcgccgtcgctctggcagtcgcaacgcttggt
gaagcgcggacgttgcgcgaagccgggatcggcgcgccgattctggcgcttggctacaca
ccgccgtggcaggtggcgcaggcagcgcggctgggtgtcgccatcacggtcttcgactat
gatgcagcacgcgcctgtgccgctgtcgccgagactggcgtgccggttccagtgcatgtc
gaggtggataccggcatggcgcgcaccggtttgagcgtggacgagttgggtccgtttctc
cgctcgcttgccggattgccgggggtgcacgtcgaagggttgtacacccattttgccgat
gccgacgctgcggatcccggcgcagcagaggcgcagttacgccgattccgcagcgcgctc
gacgcggtgaccggcgctgggctgcgtccgccggtcgtgcacgccgccaacagcgctgcc
atgttgcgtctgccgggagcgcgcttcgatatggtgcgtcctggtattgcgtgctacggg
ctggcgccatcaccctgggttacgctgccggcagcgttgcgtcctgcgctctccttccac
tctgaggtggcgcaggtgcgtgatctgcctccaggaacgccggtatcgtatggcggcaca
tttgtcacccgccgccattcgcggattgcgaccattcctgtggggtatgcggacggcatg
cgccgtgcaccgccgtggcgcgaagtgctggtgcgcggtcggcgcgccccagttgtcggg
cgcatctgcatggattacgccatgatcgatgtcaccgatcatgcggaagtcaggcgcggt
gatctggtaacgttgatcggcgtgcagggcgatgcgtgtatcaccgttgctgaggtcgcc
agctggctggggacgatcagttacgacgtggtggcgaccatcctgccgcgggtgccgcgt
gaagtgagtgaatga
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