Rhodococcus rhodochrous: 4535765_03961
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Entry
4535765_03961 CDS
T05521
Symbol
gadB
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
rrt
Rhodococcus rhodochrous
Pathway
rrt00250
Alanine, aspartate and glutamate metabolism
rrt00410
beta-Alanine metabolism
rrt00430
Taurine and hypotaurine metabolism
rrt00650
Butanoate metabolism
rrt01100
Metabolic pathways
rrt01110
Biosynthesis of secondary metabolites
rrt01120
Microbial metabolism in diverse environments
rrt02024
Quorum sensing
Module
rrt_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rrt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
4535765_03961 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
4535765_03961 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
4535765_03961 (gadB)
00430 Taurine and hypotaurine metabolism
4535765_03961 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
4535765_03961 (gadB)
Enzymes [BR:
rrt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
4535765_03961 (gadB)
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Paralog
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
SNV24309
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All DBs
Position
1:complement(4262956..4264371)
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AA seq
471 aa
AA seq
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MSEPIDPTEFRGRGVGTSDSLSLNPVFERPGEATDLPKNRMPQSESYPETAYQIVHDEAM
LDGNARLNLATFVGTWMDDFAVRLYTESADKNMIDKDEYPQTAAIETRCWTILADLWNAN
DPDNAIGTSTIGSSEACMLGGLALKRRWQKRRRSEGKSTEAPNLVLSSAVQVCWEKFCNY
FEVEARYVPITLEHRTLDGHELDKYVDENTIGVVAIMGVTYTGAYEPVAEISEALDRIAA
DTGVDVPIHVDGASGAMIAPFCQPDLVWDFRLDRVASISTSGHKYGLVYPGVGWVVWRDK
QALPDELVFYVSYLGGSMPTFALNFSRPGAQVLLQYYMFLRLGSNGYKRVQQESLAVAQY
LAQEIAKLPAFELWNDGSDIPVFAWMLKKGYTDKWTLYDLSDRLRMKGWLVPAYPMPDDL
ADVTVQRIVVRNGLSHDLATALLAEIKTEVDFLDRLETPIPREGQPVLFHH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccgatcgatcccaccgagttccgtggacgtggtgtcggcaccagcgactcg
ctttcgctcaatccggtcttcgagcgaccgggggaggccaccgacctcccgaaaaaccgg
atgccgcagtcggagtcgtaccccgagaccgcctaccagattgtgcacgacgaggcgatg
ctggacggcaacgcgcggctgaatctggccacattcgtcggcacgtggatggacgacttt
gccgttcgtctctataccgagtccgccgacaagaacatgatcgacaaggacgagtatccg
cagacggcggctatcgaaacgcgttgctggacaatacttgccgatttgtggaacgccaac
gatcccgacaacgccatcggaacgtccacgatcggttcctccgaggcgtgcatgctcggc
ggattggcactcaaacgaaggtggcagaagcgccggcgctccgaaggaaagtccaccgag
gcgccgaacctcgtgctttcgagcgctgttcaggtgtgctgggagaagttctgcaactat
ttcgaagtcgaagcacggtatgtacccatcaccttggagcacagaaccctcgacgggcac
gaactcgacaagtatgtggacgagaacaccatcggcgtcgtcgccatcatgggcgtgacg
tataccggagcgtacgaacctgttgccgagatcagtgaggcactggaccgcatcgccgcc
gacaccggcgtcgacgtcccgattcacgtcgacggcgcgtccggagcgatgatcgcgccg
ttctgtcagccggacctggtgtgggatttccggctcgaccgggtggcgtcgatcagcacg
tcgggtcacaagtacggtctcgtctatcccggcgtgggctgggtggtatggcgtgacaag
caggcgctaccggacgaactggtcttctacgtcagttacctcggcggcagcatgccaacc
tttgcgctgaacttctcacggccgggcgcgcaggtgctgttgcagtactacatgttcctg
cgcttggggtccaacggttacaaacgagtccaacaggagtcgctggcagtcgcgcagtac
cttgcgcaggagatagccaagcttccggcattcgaactgtggaacgacggctccgacatt
ccggtgttcgcgtggatgctcaaaaagggctacaccgacaagtggaccctctacgacctg
tcggacaggttgcggatgaagggatggctcgtacccgcgtatcccatgcccgacgacctg
gccgacgtcacggtgcagcggatcgtcgtgcgcaacggtttgagccacgacctcgccacc
gcgcttctggccgaaatcaagacggaggtcgacttcctcgatcggctggagacgcctatt
ccgcgtgaaggtcagccggtgctgttccaccactag
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