Rhodococcus ruber: CS378_09310
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Entry
CS378_09310 CDS
T05142
Symbol
uca
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
rrz
Rhodococcus ruber
Pathway
rrz00220
Arginine biosynthesis
rrz00791
Atrazine degradation
rrz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rrz00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
CS378_09310 (uca)
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
CS378_09310 (uca)
Enzymes [BR:
rrz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
CS378_09310 (uca)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp_5
GCV_H
Motif
Other DBs
NCBI-ProteinID:
ATQ28907
LinkDB
All DBs
Position
2070709..2074314
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AA seq
1201 aa
AA seq
DB search
MTFAFDTLLVANRGEIACRIMRSAHALGLKTVAVYSDADASAAHVEMADMAVRLGPAPAA
QSYLRADLVIEAALSAGAGAVHPGYGFLSEKAEFADACEKAGIAFIGPTPGQLRVFGDKH
TAREAARAVGVPLVEGSGLLGSVDAALAAADTVGYPVMLKAVGGGGGIGMQACHTPGELR
DAYERVQRLASAHFSSSGVFLERFVAHARHLEVQVFGDGRGRTISLGTRDCSLQRRNQKV
VEEAPAPNLPDAVVEELLASSRRLASSVSYRSAGTVEFVYDVERGEASFLEMNTRLQVEH
PVTEEVTGVDLVEWMLRLGRGETEMLDALPDSGPRILGHAVEARVYAEDPGHDYRPSAGL
LTAVEFPAHTRVETWVDTGTEVSSFYDPMLAKIIVRGESRRTAFAALAEALDDTHLYGVQ
TNLPQLRRVCTAEQVLGAAHTTATLREVRATGHRIDVLRAGTMTTVQDFPGRIGLWAVGI
PPSGPMDDLSMRAANGAVGNPEGAPALECTLQGPRLEFSDPTLVCVTGAPVVVTVDGTPV
PMWEPLEVPAGGVLDVGSPTEQGLRTYVAVRGGLDAPLYHGSASTFTLGGFGGLTGRAVA
TGDVLGVAESRALASPAPVPVDRRPEFTHTWHLAVTEGPQPAPAYFTEDDLAQFYDTTWT
VQSHANRTGIRLDGPKPTWSRTDGGEAGLHPSNLHDNPYSVGALNVSGDTPILLGPDGPS
LGGFACPLTVVSGHRWKMGQIRPGDSVRFVPVTDEAAVELRGAATRALDVPPVARPAALD
GGRLAGTPAFLDRPEVGYLRGGDDNILVEYGDMVLDLGLRMRVHALSEALAALRLSGIVD
VTPGVRSLHVHFDPDVLPQHRLLGALQDLETELPATHDLVVPSRTVRLPLSFDDPSIAEA
ISRYHSGVRDSAPWLPSNTEFIRRINGLDSVEQVRDTVFDAEYLVLGLGDVYLGAPLAVP
LDPRHRLVTTKYNPARTWTPSDAVGIGGKYLCVYGMESPGGYQLIGRTVPIWSGYRQSGP
FEDGKPWLFRFFDRIVWEPVSPEQLLEYRAASLAGRFDADVSEGTFALADHLRFLADNAE
SIDAFHERQAAAFETEKQAWHAAGEFDRAETTPAEVTEAVDPLAGMPAGSVVVEAPMVGN
VWRVEVAEGQQVGADDTAVILEAMKLEMPVPAAVDGIVLKVLVGPGAKVAPGTPLLVIGA
A
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
gtgacgttcgctttcgacaccctgctcgtcgccaaccgcggcgagatcgcttgccgcatc
atgcgttcggcgcacgcgctggggctgaagaccgtcgccgtgtactcggatgcggacgcg
tccgccgcgcacgtcgagatggcggacatggccgtgcgtctcggcccggccccggcagcg
cagtcgtatctccgggcggatctggtaatcgaggcggccctgtcggcgggcgccggcgcg
gtccatcccggctacggattcctctcggagaaggccgaattcgcggacgcctgcgagaag
gcgggcatcgcgttcatcgggcccacccccgggcagctgcgggtcttcggcgacaagcac
accgcgcgagaggcggcacgcgccgtcggcgtcccgctcgtcgagggcagcggcctgctc
gggtccgtcgacgccgccctcgcggccgccgacaccgtcggttaccccgtgatgctcaag
gccgtcggcggcgggggcggcatcgggatgcaggcctgccacactccgggcgaactgcgg
gacgcgtacgagcgggtgcagcgtctcgcgtccgcacacttctcctcgtcgggggtgttc
ctcgaacggttcgtcgcacacgcccgccacctcgaggtgcaggtgttcggcgacggtcgc
ggccgcacgatcagcctcggtacgcgcgactgctcgttgcagcgacgcaaccagaaggtc
gtcgaggaggcgcccgccccgaacctgcccgacgcggtcgtcgaggaactgctcgcgtcg
tcgcgccggctcgcgtcgtcggtgagctaccgctccgccggcaccgtggagttcgtgtac
gacgtcgaacgcggtgaggcctcgttcctcgagatgaacacccgtctgcaggtggagcat
ccggtcaccgaggaggtcacgggcgtggacctggtggagtggatgctgcggctcggccgg
ggcgagaccgagatgctcgacgccctgcccgacagcgggccccgcatcctcggtcacgcc
gtggaggcgcgcgtgtacgcggaggacccggggcacgactaccggcccagcgccggactg
ctcaccgccgtcgagttcccggcccacacccgcgtcgagacgtgggtggacaccggcacc
gaggtgagttcgttctacgacccgatgctcgccaagatcatcgtgcgcggcgagtcccgc
cgcaccgcgttcgcggcgctcgccgaggcgctcgacgacacgcacctgtacggcgtgcag
acgaatctgccgcagctgcggcgcgtctgcacggcggagcaggtgctcggggccgcccac
accaccgcgacgctgcgggaggtacgggcgacgggccaccgcatcgacgtgctgcgcgcg
ggcaccatgaccacggtgcaggacttccccggccggatcgggttgtgggcggtcggcatt
ccgccgtcgggtccgatggacgacctgtcgatgcgcgccgcgaacggcgcggtcggcaat
ccggagggggcaccggcgctggagtgcacgttgcagggcccgcgcctcgagttctccgac
ccgacgctcgtctgcgtcaccggtgccccggtcgtggtcaccgtcgacgggacccccgtg
ccgatgtgggagcccctggaggtgccggccggcggcgtgctcgacgtcggatcgccgacc
gagcagggcctgcgcacctacgtcgcggtgcgtggcggactcgacgccccgctctaccac
ggcagcgcttcgacgttcacactcggcggcttcgggggcctcaccggcagggccgtggcc
acgggcgacgtgctcggtgtggccgagtcccgcgcgctagcctccccggcaccggtaccc
gtggaccgtcggccggagttcacccacacgtggcatctcgccgtcaccgagggtccgcag
cccgcaccggcctacttcaccgaggacgacctggcccagttctacgacaccacgtggacg
gtgcagtcccacgcgaaccgcaccggcatccgtctggacggcccgaagcccacctggtcg
cggacggacggcggcgaggccgggctgcacccgtcgaacctgcacgacaacccctactcg
gtgggcgcgctcaacgtctcgggcgacaccccgatcctgctcggcccggacggtccgagc
ctgggcgggttcgcctgcccgctcacggtcgtctccggtcaccgctggaagatggggcag
atccggcccggggattcggtgcggttcgtccccgtgaccgacgaggccgcggtcgagctg
cgcggcgccgccacccgcgccctcgacgtcccgccagtggcgcggcccgccgcgctcgac
ggcggccggctggccggtaccccggctttcctggaccgtcccgaggtggggtacctgcgc
ggcggcgacgacaacatcctcgtcgagtacggcgacatggtgctcgacctggggttgcgg
atgcgggtgcacgccctgtccgaggcgctcgcggcgctgcgcctgtcggggatcgtcgac
gtcacgcccggggtgcgctcgctgcacgtgcatttcgacccggacgtgctgccccagcac
cgcctgctcggggccctgcaggacctcgagacggaactgccggccacgcacgatctggtg
gtgcccagccgcaccgtccggttgccgctctcgttcgacgacccgtcgatcgccgaggcg
atctcccgctaccacagcggtgtgcgcgactcggcgccgtggctgccgtcgaacaccgag
ttcatccggcgcatcaacggactcgactcggtcgagcaggtccgggacacggtgttcgac
gccgagtacctcgtcctcggtctcggcgacgtgtacctcggtgcgccgctggccgtcccg
ctcgacccccggcaccggctcgtgacgacgaaatacaacccggcacgcacgtggaccccg
tcggacgccgtgggcatcggcggcaagtacctgtgcgtctacgggatggagtcccccggc
ggctaccagttgatcgggcggacggtaccgatctggtccggataccggcagtccgggccg
ttcgaggacggcaagccgtggctgttccgcttcttcgaccggatcgtatgggaaccggtg
agcccggaacagctgctcgagtaccgcgccgcgtccctggcgggccggttcgacgccgac
gtctcggagggtacgttcgccctcgccgaccatctgcggttcctggcggacaatgccgag
tccatcgacgcgttccacgagcgtcaggccgcggcgttcgagaccgagaagcaggcatgg
cacgcggccggtgagttcgaccgggccgagacgacaccggcagaggtcaccgaggccgtc
gacccgctcgccgggatgccggcgggatcggtcgtcgtcgaagcccccatggtcggcaac
gtgtggcgggtcgaggtggcggagggccagcaggtcggcgccgacgacaccgccgtcatc
ctcgaggccatgaagctcgagatgccggtgccggccgccgtggacgggatcgtcctgaaa
gtcctcgtcgggccgggcgcgaaggtcgcccccggcactccccttctcgtgatcggagca
gcatga
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