Runella slithyformis: Runsl_0938
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Entry
Runsl_0938 CDS
T01553
Name
(GenBank) transcriptional regulator, LysR family
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
rsi
Runella slithyformis
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsi03000
]
Runsl_0938
Transcription factors [BR:
rsi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Runsl_0938
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
Motif
Other DBs
NCBI-ProteinID:
AEI47374
UniProt:
A0A7U3ZHL1
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All DBs
Position
1108262..1109158
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AA seq
298 aa
AA seq
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MSDFRLKVFNSVAQHLSFTKAAGELFITQPAVTKHIRELEQQYATRLFERKGNAVYLTPA
GELLKRYAGQILHLYQEAAFELSTLQSKHSGILRLGASTTIGQYLIAPLLAKYYEKFPQI
ELSLLNGNTEMIENAILSHAIDLGVVEGKKHHSGIKYVDFMDDELVAVVHSNSKLAPLEE
ITIEQLTHIPLVLRERGSGTLEVIESALKEHNLKLSSLQIIMHLGGTESIKSFLEHANCM
AFLSIRSIQKELLTGQLKLIKVKELALLRKFWLIHLQGQPEPLAESFMRFAFREYSRK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgattttcgtcttaaagtattcaacagcgtggcccaacacctcagctttaccaaa
gcggcgggggaattattcattacgcaaccggccgtcacgaagcacattcgggaactggaa
caacaatacgccacgcgcctgtttgaacgaaaaggaaacgccgtctaccttactcccgcc
ggcgaactgctcaaacgttacgccggtcagatcctgcacctgtatcaggaagccgctttt
gaactcagcacgctgcaatcgaagcacagcggcatccttcggttgggtgccagcacgacc
ataggacaatacctgattgcgccgctgttggccaaatattacgagaaattcccccaaata
gagctttcgttgctcaacggcaacaccgaaatgattgaaaatgccattttgtcgcacgcc
atagatctgggcgtggtggaaggaaaaaagcaccattcgggcatcaaatacgtggatttc
atggacgatgaactcgtggcagtagtacacagcaacagcaaattggcgccgttggaagaa
attacgatcgagcagcttacccacattccgctcgtgctgcgtgagcgcggttcgggtacg
ctggaggtaatcgaaagtgccttgaaagaacataacctgaaactgtcttctctccagatc
atcatgcatttgggcggtacggaaagcatcaaatcctttttggaacacgccaactgcatg
gcttttctgtccattcgttccattcagaaagaactgctgaccggccagttgaaactcatc
aaagtgaaggagttggcgcttttacgaaaattctggttgatccatttacagggccaaccc
gagcccttggccgaatccttcatgcgttttgcctttcgggaatacagcagaaagtag
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