Runella slithyformis: Runsl_1888
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Entry
Runsl_1888 CDS
T01553
Name
(GenBank) alpha amylase catalytic region
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
rsi
Runella slithyformis
Pathway
rsi00500
Starch and sucrose metabolism
rsi01100
Metabolic pathways
rsi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Runsl_1888
Enzymes [BR:
rsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Runsl_1888
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
hDGE_amylase
Malt_amylase_C
Alpha-amylase_C
Motif
Other DBs
NCBI-ProteinID:
AEI48312
UniProt:
A0A7U3ZJF9
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All DBs
Position
2147152..2148618
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AA seq
488 aa
AA seq
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MTYPHICYEIFVRSFCDSNGDGIGDLNGITAKLDYLQELGIEAIWLSPIQRSPSYHKYDV
VDYYSIDPEYGTLDDFKRLLAEAHARGMAVIMDLVINHTSIYHPWFQESVKGKDNPYRHF
YTWKSPEEIERLGIATREASADTAGRNPWHPWRYNAEKYYGLFWKGMPDLNCDYPPVRRA
IYEIGRYWLNEGVDGFRLDAARHIYPEWEEHKNYDFWVEFRTEMQKANPEVYLVGEVWTA
AENIAPYFKGLTANFNFDLGLAIQKVTADERDTVQLATTLAATRAVFFQTNPQFVDAIML
TNHDQTRIGSVLEGDIRRLKVAANLLLTLPGQPYLYYGEELGMLGQKPDEYIREPFLWDY
REKDRRRARWIRPKYSKSNTVVPLAGQVNDSDSLFNHYKRLIHFRKSHPVLADIHGFVEP
LPNEDARCIAFVRKSNGRSVWVIHNLSGKTVTYSAQNMPSQLLFSTHPDSRLVHNGLSLA
PYSCVVLE
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttgacttatccacacatctgttacgaaatcttcgttcgctcgttttgcgactccaacggc
gacggcatcggtgacctcaacggcattaccgcaaaattggactatttgcaggagttgggc
attgaggccatttggctttcccccattcagcgatctccaagttatcacaaatacgatgtc
gtagattactattccattgatcctgaatacggcacattggatgatttcaaacgcctgctc
gccgaagcgcacgctcgcggtatggccgtgatcatggatctggtcattaatcatacaagt
atctatcatccgtggtttcaggaatctgtaaaggggaaagataatccttatcgacacttt
tacacctggaaaagccccgaagaaattgaacggctgggcatcgctacgcgtgaggcttct
gccgatactgccgggcgtaacccctggcatccgtggcggtacaacgctgaaaaatattac
ggacttttctggaaaggaatgcccgacctgaattgtgattatccgcccgttcgtcgggcg
atctatgaaataggacgctattggctcaacgagggtgtcgatggatttcggctcgatgcc
gcgcgtcatatctaccccgaatgggaagagcataaaaactacgatttttgggtcgaattt
cgtaccgagatgcaaaaggcaaacccggaagtgtatttggtgggcgaagtatggacggcc
gctgaaaacatcgcgccttacttcaaagggctgaccgccaattttaattttgacttaggc
ctggccattcagaaagtgactgccgacgagcgggatactgtacaactggcgacaacgctg
gccgcgactcgggctgtgttctttcagacaaaccctcaatttgtcgatgccattatgctc
accaaccatgaccaaacgcggattggcagtgtcttggagggagatatccgccgcctcaaa
gtagctgccaatctattgctgactctccccggacaaccttatctgtattatggagaagaa
ctcggaatgttgggacaaaagcccgatgaatatatccgggagccgtttttgtgggactat
cgcgaaaaagaccgccgacgggcccgttggataaggcccaagtacagcaaaagcaatacg
gtcgttccgttggccggacaggtcaatgactcggattctctctttaatcattacaaacga
ctcattcattttcggaaatcgcaccccgttttagcggatattcacggctttgttgaaccg
ctgccgaatgaagatgcccgatgtattgcctttgttcgaaaatcaaacggacggtctgtt
tgggtgattcataacctttcaggtaaaacagtgacttactccgcccaaaatatgccttcc
caacttcttttcagcacgcatccggacagcagacttgtacacaatgggctttcgttggca
ccgtacagttgtgtggtgttggaatag
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