Runella slithyformis: Runsl_2009
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Entry
Runsl_2009 CDS
T01553
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
rsi
Runella slithyformis
Pathway
rsi01501
beta-Lactam resistance
rsi01503
Cationic antimicrobial peptide (CAMP) resistance
rsi02020
Two-component system
rsi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Runsl_2009
09132 Signal transduction
02020 Two-component system
Runsl_2009
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Runsl_2009
01503 Cationic antimicrobial peptide (CAMP) resistance
Runsl_2009
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rsi02000
]
Runsl_2009
02044 Secretion system [BR:
rsi02044
]
Runsl_2009
01504 Antimicrobial resistance genes [BR:
rsi01504
]
Runsl_2009
Transporters [BR:
rsi02000
]
Other transporters
Pores ion channels [TC:
1
]
Runsl_2009
Secretion system [BR:
rsi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Runsl_2009
RTX toxin transporter
Runsl_2009
Multiple protein transporter
Runsl_2009
RaxAB-RaxC type I secretion system protein
Runsl_2009
Antimicrobial resistance genes [BR:
rsi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Runsl_2009
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Runsl_2009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6792
Motif
Other DBs
NCBI-ProteinID:
AEI48425
UniProt:
A0A7U3ZJM6
LinkDB
All DBs
Position
2304264..2305589
Genome browser
AA seq
441 aa
AA seq
DB search
MLQLSKLLFLAIGALLWSLNASAQKTLTLRECVELLTKNNLTYREGQLQAQMADAQVQQS
RSLQLPQLGFSAGQNLNFGRSIDRFTNAYIDQLYNTNGIGLGFQVPLFQGFQIQHQIQQG
IALRDAALKNREAVLNQQVIRVLQAYVQVLANKALYEAARQQVVSSQQQVERVEKQVAAG
TVGQNTLYEIKAQLANDKFDEVTARNNEQLAKLTLFQLMNIQPEKDVVLEPIADAATALS
EAPSAEAIYDDAVKMFPEVKSSELRLSSFTGQIKAIQANSLPALSLSGNFAAFYASTNAE
RSYFKQLDATRNGSLSVGLNIPIMGRWQVRPRVDVARAQQALARNQVDVVKQLLRQSIEL
AVQQLDATTDRYAAAQSQVESLDANFAAAESRLNAGMINVFEYTLAKANLARAQANAIRS
RYEYALQRQIIEFYRKGKWEF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgttacagttatctaaactactatttttagccattggcgcgctgctttggagcctcaat
gcaagtgcccaaaagacgttgaccttgcgggagtgtgtggaattgttgacaaaaaacaac
cttacgtaccgtgagggtcaattgcaggcacagatggcggatgcacaggtgcagcaatcg
cgctcgctgcaattgcctcaattgggattcagtgccggacaaaacctgaacttcggccgc
agtatcgaccggtttaccaatgcctatattgatcagttatacaataccaatgggattggc
ttagggtttcaggtgccgctgtttcaggggtttcagattcagcatcagattcagcagggc
attgccctgcgtgatgcagccctgaaaaaccgggaagctgtcctgaatcagcaggtaatt
cgcgtgcttcaggcctatgtgcaggtattggccaacaaggcattgtatgaggctgcacgt
cagcaggtggtctcatcgcagcagcaggtggagcgggtggaaaagcaggttgccgccgga
acggtcggacaaaataccctgtatgaaataaaagcccaattggctaatgataaatttgac
gaagtaaccgcgcgcaacaacgagcaattggccaaattgacgctgtttcagttgatgaat
attcaacctgaaaaagacgtagtgcttgagcccattgccgacgccgccacagcattgagt
gaggccccttcggccgaggcaatttatgacgatgccgtaaagatgtttccggaggtaaaa
agcagcgagctgcgcctgagcagttttaccggtcagatcaaagccattcaggccaacagc
cttccggccttaagtctttcgggcaattttgccgccttttatgcatctaccaacgctgag
cgcagctatttcaaacagcttgacgctacccgaaacggatcgctgagtgtagggttaaat
attcccatcatggggcgttggcaggttcgtcctcgggttgatgtggccagagcgcagcag
gccctggcacgaaatcaggtagatgtggtaaagcaattgctgcggcaatcgatcgaattg
gccgtgcaacagttggatgctaccaccgaccggtacgctgccgctcaaagccaggttgag
tcattggatgccaactttgcagccgccgaaagccgcctgaatgcaggcatgatcaatgta
tttgaatacacactggccaaagccaatttggctcgggcgcaggccaacgccattcggtcg
cgctacgaatacgctctccaacgacagataattgaattttatcggaaaggaaaatgggaa
ttctag
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