Runella slithyformis: Runsl_3388
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Entry
Runsl_3388 CDS
T01553
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
rsi
Runella slithyformis
Pathway
rsi00020
Citrate cycle (TCA cycle)
rsi00480
Glutathione metabolism
rsi01100
Metabolic pathways
rsi01110
Biosynthesis of secondary metabolites
rsi01120
Microbial metabolism in diverse environments
rsi01200
Carbon metabolism
rsi01210
2-Oxocarboxylic acid metabolism
rsi01230
Biosynthesis of amino acids
Module
rsi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rsi_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Runsl_3388
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Runsl_3388
Enzymes [BR:
rsi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
Runsl_3388
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Gene cluster
GFIT
Motif
Pfam:
Iso_dh
Isocitrate_DH_C_bact
YmgB
Motif
Other DBs
NCBI-ProteinID:
AEI49754
UniProt:
A0A7U4E727
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All DBs
Position
complement(3950711..3952183)
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AA seq
490 aa
AA seq
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MILLCKKKQQMTKTKITVANGDGIGPEIMEATLDILFAAGANIEVEHIEVGEKVYLSGNT
SGIAASSWDSIRQNKVFLKAPITTPQGGGYKSLNVTTRKMLGLYANVRPCHSYFPFVSSK
HPKMDLVIIRENEEDLYAGIEHQQTDEVIQCLKLVSRPGCEKIIRYAFEYARQYNRKKIT
CFTKDNIMKQTDGLFHSVFDEIGAEYPEIEKEHWIIDIGSAKMADTPEVFDVIVTLNLYG
DVISDIAAQIAGSVGLAGSANIGEHAAMFEAIHGSAPRRAGQNMANPSGLLQGAILMLNH
IGQPEVAEKIQNAWLKTLEDGIHTYDIYKEGHSQQKVGTKEFAQAVIERLGQLPQQLAPV
SYATGAAIQLKPYVRKPARTKELVGTDVFLHWPGLNPDELGQIVSQFSTESLALSMISNR
GIKVWPAGFAETFCTDHWRCRFTATNQQKVSSKDIIAILEKAVEHQLDVIKTENLYTFDG
KAAYSLGQGQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgattttactttgcaaaaaaaaacaacaaatgaccaagacaaaaattaccgttgccaac
ggcgacggcatcggcccggaaatcatggaggccaccctcgatatcctgtttgccgccggc
gcaaacatagaagttgaacacattgaagtaggcgaaaaggtgtatctgtcgggcaatacc
tccggcatagcagcttcgtcctgggactcgatccgacaaaataaagtattcttaaaagct
cccattaccaccccgcagggaggcggatataaaagcctcaatgtgaccacccgcaaaatg
cttggcctatacgccaacgttcgcccctgccacagttattttccgtttgtttcttcaaag
catcccaaaatggatctggtcatcatccgtgaaaatgaggaagacctctacgcgggtatt
gagcaccaacaaaccgacgaagtcattcaatgcctgaagttggtcagccgcccgggttgt
gagaagatcattcgctatgcctttgagtacgcccgtcaatataaccgtaaaaagataacc
tgtttcactaaagataacattatgaagcaaaccgacgggttgtttcacagtgtctttgat
gaaatcggtgccgagtatcctgagatcgaaaaagagcactggatcatcgacatcggctcg
gccaaaatggccgatacacccgaagtgttcgacgtgatcgtcacgctcaacctttacgga
gatgtgatctccgacattgccgctcaaattgcgggttcggtaggattggccggctcggcc
aacattggtgagcacgccgccatgtttgaagccattcacggctcggccccgcgccgggcg
ggtcaaaatatggccaatccttcgggcttattgcagggtgcgattttgatgcttaaccac
atcggacagccggaagtagctgaaaaaatacagaatgcatggctgaaaacactggaagac
ggcattcatacctatgatatctacaaagaaggtcacagtcaacaaaaagtaggtaccaaa
gaatttgcccaggccgttatagaacggttgggacaactcccgcagcaactggccccggtc
agctacgccaccggagcggcaattcaactcaaaccttacgtacgcaaacctgcccgcacc
aaagaactcgtgggcacagatgtatttttgcactggcccggcctgaatcccgacgaattg
gggcagatcgtatctcaattttcgaccgaatcgctggccctgtcaatgatttccaaccga
ggtatcaaagtatggccggcaggcttcgccgaaaccttctgcaccgatcattggcgctgt
cggtttacggccacgaatcagcaaaaagtttcttcaaaagacattattgcaattttggaa
aaagccgttgaacaccaattggacgtaattaaaacggaaaacctgtacacatttgacggt
aaagctgcttactcattaggacaaggacaataa
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