Runella slithyformis: Runsl_3564
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Entry
Runsl_3564 CDS
T01553
Name
(GenBank) Recombination protein recR
KO
K06187
recombination protein RecR
Organism
rsi
Runella slithyformis
Pathway
rsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Runsl_3564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsi03400
]
Runsl_3564
DNA repair and recombination proteins [BR:
rsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Runsl_3564
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Runsl_3564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_ZnF
RecR_C
Toprim
HHH_5
Ras_bdg_2
zf-P11
HHH
FadR_C
Motif
Other DBs
NCBI-ProteinID:
AEI49925
UniProt:
A0A7U3ZMG3
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All DBs
Position
4141585..4142190
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AA seq
201 aa
AA seq
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MNFPSKLIEQAVGEVSKLPGIGKKSALRIVLHLLKRSENETQSLADALVAVRTQIQYCRK
CHNISDSELCSICLSPKRDASVVCVVQDSRDVLAIENTGQYTGLYHVLGGIISPLEGVSP
GDLKIESLLQRLKHAPEVREIILALSPTMEGDTTSFYLQKKLRPFSLKISTIARGIPIGG
DLEYADEITLGRSIVSRINYD
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaattttccctcaaaattaatagaacaggcggtaggtgaagtgtcaaagctgccgggc
attggtaaaaaaagtgctttacggattgtacttcacttactcaaacgtagtgaaaacgaa
actcagtcgttggctgacgcgttggtggcagtccgaacccaaattcagtactgtcgaaaa
tgtcataatatttcagacagtgagctgtgcagcatctgtttaagccccaaacgcgatgcc
tcggtggtctgtgtcgtacaggatagccgtgatgtgctggccatcgaaaacaccgggcag
tataccggcctttatcacgtacttggaggaatcatttcaccccttgagggggtcagtccc
ggcgatttaaaaatagaatctcttctgcaacggcttaaacatgcccctgaagtcagggaa
attatactggccctcagtccgacgatggaaggtgatacaacttccttttatctgcaaaaa
aagctaaggccgttttcgttgaaaatttcaactattgcccgcggtatccccatcggtggg
gatcttgaatacgccgatgaaatcacattgggtcgaagtatagtgagtagaatcaattac
gattag
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