Ralstonia pseudosolanacearum GMI1000: RSc0685
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Entry
RSc0685 CDS
T00071
Symbol
rfbC
Name
(GenBank) probable dtdp-4-dehydrorhamnose 3,5-epimerase protein
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00521
Streptomycin biosynthesis
rso00523
Polyketide sugar unit biosynthesis
rso00541
O-Antigen nucleotide sugar biosynthesis
rso01100
Metabolic pathways
rso01110
Biosynthesis of secondary metabolites
rso01250
Biosynthesis of nucleotide sugars
Module
rso_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RSc0685 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RSc0685 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RSc0685 (rfbC)
Enzymes [BR:
rso01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RSc0685 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CAD14215
UniProt:
Q8Y1K5
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All DBs
Position
732998..733549
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AA seq
183 aa
AA seq
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MNLNVVPTAIPEVLILEPKVFGDDRGFFFESFNARAFEQVTGVKRTFVQDNHSRSARNVL
RGLHYQIQHPQGKLVRVTVGEVFDVAVDLRKRSPTFGKWVGVTLSAENKRQLWVPEGFAH
GFVVTSDHAEFLYKTTDYWYAEHERSIVWNDPDLGIEWPVQGTPVLAAKDAAGARFASAD
LFD
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaacgtcgttcccaccgccattccggaggtcctgatcctcgagccgaaagtg
tttggcgacgaccggggcttcttcttcgagagcttcaacgcgcgtgccttcgagcaggtc
acgggcgtcaagcggaccttcgttcaggacaaccattcgcgctcggcccgcaatgtgctg
cgcggcttgcactaccagatccagcatccgcagggaaagctggtgcgcgtgacggtcggt
gaagtcttcgatgtcgcggtcgatctgcgcaagcgctcgccgaccttcggcaagtgggtc
ggcgtgacgctgtcggcggagaacaagcgccagctgtgggtgccggaagggtttgcgcat
ggctttgtcgtgacctccgaccacgccgagttcctgtacaagaccaccgactactggtac
gccgaacacgagcgcagcatcgtctggaacgacccggacctcggcatcgagtggccggtc
cagggcacgccggtcctggcggcgaaagatgccgccggcgcgcggtttgccagcgcggac
ttgttcgactga
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