Ralstonia pseudosolanacearum GMI1000: RSc2842
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Entry
RSc2842 CDS
T00071
Symbol
ddl
Name
(GenBank) probable d-alanine--d-alanine ligase (d-alanylalanine synthetase)(d-ala-d-ala ligase) protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rso
Ralstonia pseudosolanacearum GMI1000
Pathway
rso00470
D-Amino acid metabolism
rso00550
Peptidoglycan biosynthesis
rso01100
Metabolic pathways
rso01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rso00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RSc2842 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSc2842 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RSc2842 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rso01011
]
RSc2842 (ddl)
Enzymes [BR:
rso01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RSc2842 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rso01011
]
Precursor biosynthesis
Amino acid ligase
RSc2842 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
ATP-grasp_4
CPSase_L_D2
GARS_A
ATPgrasp_ST
SEEK1
TTL
Motif
Other DBs
NCBI-ProteinID:
CAD16549
UniProt:
Q8XVI9
LinkDB
All DBs
Position
complement(3056943..3057938)
Genome browser
AA seq
331 aa
AA seq
DB search
MTTGPFVPHPTLDPKSLGKVGVILGGRSAEREISLLSGNGVLAALRSRGVDAHPFDPGTQ
PVAGLAAQGFHRVVISLHGRFGEDGTIQGLLEQFGIPYTGSGVLASALAMDKEATKRLWQ
THSLPTPDFVMLHAGADWQAVADRLGLPLIVKPAREGSSIGLTKVTSVAELPAAYEKAAR
LDRDVMAEQFIDGDELTCAVIGEGEHATALPLIRIVAPQANYDYQHKYFTDDTRYECPAP
IPAEAAARVQALVVQAYRSLGCRGWGRADIMLRKHDGAPFLLEMNTSPGMTGHSLVPMAA
RAVGISYEDFVLQLAATASLELRASHDWKPE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccggtccgttcgtcccccatccgacgctcgatccgaagtccctcggcaaggtg
ggcgtgatcctcggcggtcgctcggccgagcgcgagatctcgctgctgtcgggcaacggc
gtgctggcggcgctgcgctcgcgcggcgtcgacgcgcatccgttcgacccgggcacgcag
ccggtggccgggctcgccgcgcagggcttccaccgcgtggtgatctcgctgcacggccgc
ttcggcgaggacggcacgatccaggggctgctcgagcagttcggcattccctacaccggc
agcggcgtactcgcgtctgcgctggcgatggacaaggaagccaccaagcgcttgtggcag
acgcacagcctgccgacccccgatttcgtgatgctgcacgccggcgccgactggcaggcc
gttgccgaccgcctgggcctgccgctgatcgtcaagccggcgcgcgagggctcgtcgatc
ggcctgaccaaggtgaccagcgtggccgaattgcccgccgcctacgaaaaggccgcgcgc
ctggaccgcgacgtgatggccgaacagttcatcgacggcgacgagctgacctgcgccgtg
atcggcgaaggcgagcacgcgacggcgctgccgctgatccgcatcgtcgcgccgcaggcc
aactacgactaccagcacaagtacttcaccgacgacacgcgctacgagtgccccgcgccg
attcccgccgaagcggcggcgcgcgtgcaggcgctggtggtgcaggcgtatcgcagcctg
ggctgccgcggctggggccgcgccgacatcatgctgcgcaagcacgatggcgcgccgttc
ctgctcgagatgaacacctcgccgggcatgaccgggcattcgctggtgccgatggccgcg
cgcgcggtgggcatcagctatgaagatttcgtgctgcagctggcggcgaccgcgtcgctt
gagctgcgcgcgagccacgactggaaaccggaataa
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