Ralstonia pseudosolanacearum GMI1000: RSp1236
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Entry
RSp1236 CDS
T00071
Name
(GenBank) putative type III effector protein
Organism
rso
Ralstonia pseudosolanacearum GMI1000
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEL
Motif
Other DBs
NCBI-ProteinID:
CAD18387
UniProt:
Q8XQI9
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Position
megaplasmid:1570422..1572239
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AA seq
605 aa
AA seq
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MPPPIRNARTTPPSFDPSAAGDDLRATPPRVAAATPTHRTAPSQLAGLPSRPRLQPPQPD
PTPTPLAPRGNTHTGSATGRLIALALANPAANRTPGRLAGGLHLPSIDNGNPVLASLNVA
SGELAEIGAAALLATRLRLPSIALDGPRARGPAATLLAGLEHRTRALSLAQEPGGLGPGH
PPLAVLPDIVAAALANSNSLRDLLDRHPASVLANRLRGVGPAQPAADPSLGHAQRAAQIL
EGWAQQCQLPPKTVDAWRPVLNQEESRPFVSLLARLNGCASFRPAHRAESLKELGGILQL
AAHNDAYRTRCFDICGGADANCHDNVDVIFGNLRLAARDPSYHGNAQLHEVLSYHNRCMP
WTLIDDFVSHRFGRGDQLERALALRVRLSDILPITTPAMLHHDIARIDNAHEREARAYIS
AHLGTQEHLLRNLSRSPAWRQFLEQQRPVEFAANTLLWESALQDVMAKPAGDGAVADAPR
AASTTAPGSRTEALAQAHAMPGIGTGQAFQHRQENATAMLAETMTRKLVMESAPPPDETG
AHAALLTDPDWLAYLQKEHPEDRAFSPADMHAAERHDLLMRLTRQEIAEARGMVQPHAGA
PTDHG
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctcccatccggaacgcacgcaccactccgcccagcttcgacccatcggctgcc
ggcgatgatctccgcgccacgccgccacgagtggccgccgccaccccgacgcacagaacc
gccccatcccagcttgccggcctgccgtcgagaccgaggctgcaaccgcctcagccagat
ccgacaccgacaccattggccccgcgcggcaacacccacaccggatcggcaaccggccgc
ttgatcgcccttgcccttgcgaacccggctgcgaaccggacgccaggccgccttgcaggc
ggcctgcacctgccgtcgatcgacaacggcaatcccgtcctggcgtccctgaacgtcgcc
tccggagaactggctgaaatcggcgctgccgccctgcttgcaacccgcctgcgcctgcca
tcgatcgccctcgacggcccgcgggcgcgcgggccggccgcaaccctgctggcaggtcta
gagcatcggacgagagcactgtcattggcacaggagccgggcggcctgggcccaggccat
cctccattggccgtcctgcccgacatcgtcgcagccgccttggcaaacagcaacagcctg
cgcgacttgctggacaggcaccctgcaagcgtgttggcgaaccggttgcgcggcgtcggc
ccagcccagcccgcagccgacccatccctgggacacgcgcagcgcgcggctcaaatcctg
gaaggctgggcacagcaatgccagctgcctcccaagaccgtcgatgcatggcgccccgtg
ctcaaccaggaagagagccgtccgttcgtcagcctccttgcccggctgaacggctgcgca
tcgttccggcccgcgcatcgcgccgagtccctcaaggagctgggcggcatcctgcagctg
gccgcgcacaacgacgcctaccgcacccggtgttttgacatctgcggcggcgccgacgcc
aactgccacgataacgtcgacgtcatcttcggcaacctgcggctggcggccagggacccg
tcgtaccacggcaacgcccagttgcacgaggtcctgagctatcacaatcgctgcatgccc
tggacgctgatcgacgacttcgtgtcgcaccggtttgggcggggcgaccagctggagcgg
gcgctcgctctgcgggtgcgcctgtccgacatcctgccgatcacgacgccggccatgctt
caccacgacatcgcccgcatcgacaatgcgcatgagcgcgaagcgcgcgcctacatcagc
gcccatctcggtacgcaagagcacctgctgcgcaacctgtccagaagcccggcctggcgc
cagttcctggaacagcagcgtcctgtcgaattcgccgccaatacgctgctgtgggaatcc
gcgctgcaggacgtcatggccaaaccggccggcgacggcgccgtggccgatgcgccgcga
gccgcaagcacgacggcccccggttcacgcaccgaggccctggcccaggcgcacgcgatg
cccggcatcggcaccggccaggcgttccagcacaggcaggaaaacgccaccgccatgctg
gccgaaacgatgacgcgcaagcttgtcatggagagcgcgccgccgccggacgaaaccggc
gcccatgccgcgctgctcacggaccccgactggctggcctacctgcagaaggagcatccg
gaagaccgcgccttctcacctgccgacatgcatgccgccgagcggcacgacctgctgatg
cggctgacccggcaggaaatcgccgaggcgcgcggcatggtccagccgcacgccggcgcg
ccgacggaccacggctga
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