Rickettsia slovaca 13-B: Rsl_993
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Entry
Rsl_993 CDS
T01671
Symbol
uvrC
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
rsv
Rickettsia slovaca 13-B
Pathway
rsv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rsl_993 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsv03400
]
Rsl_993 (uvrC)
DNA repair and recombination proteins [BR:
rsv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rsl_993 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
GIY-YIG
UVR
HHH_5
HHH_2
DHO_dh
GIY_YIG_2
Apolipoprotein
Menorin
Motif
Other DBs
NCBI-ProteinID:
AEV92428
LinkDB
All DBs
Position
complement(821540..823459)
Genome browser
AA seq
639 aa
AA seq
DB search
MTLEITGSELIKSKLIDAPERSGVYRMFDVNKQVLYVGKAKNLKKRLTNYIKSNLDNKTL
RMIANTCFLEYSITNSEVEALLLEAQLIKKFQPKFNILLKDCKSFPFIKLRLDHDFPQLL
KYRGKTLSDGKFFGPFASSAEVNTTLTELQKIFKLRSCTDNYFNSRTRPCLQYEIKRCYA
PCVGKINKEDYRDLVTQVKDFLQGRTKELQENLSRKMEELSSQMRFEEAAEIRDRIKALS
YVQLKAGVSDVVKDADIIAIVEKNGHYCVEVFLYRAGQACGNIPYFPTSTENSTKEEVLE
YFLLQFYQKQHVPAAIIINHEINDKENVIEAIKKINDILQLNITVPNKGGKAKLVQNAET
NALFSLEQYLKKFAKNQEIMFEIKELFGLSEIPERIEIYDNSHIQGKFAVGVMVVAGKVG
FDKKEYRVFNVHAPSLVCHSRESGDPKRLMDSCFRGNGIKNCGGDIKGNDYEMLRQVLTR
RLTRLRQEPHKLPSLMIIDGGKGHLGVVKEVMDKFEMNIPFVCMSKGVDRNAGFEQFHVI
GKEVFTLDKNLPVMKYLQILRDEAHNFAIKNHRLGRSRAIKISRLDDIEGVGETRKKALL
HYFGSYKAVCDATIYELAKVNGINKLLAEMIFNVLHRKN
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaccctagaaattaccggaagtgagttaattaaatctaaacttatagatgctcctgaa
cgttcaggggtttatcgaatgtttgacgttaacaagcaagttctctatgtcggtaaagct
aaaaatttaaagaaacgccttactaattacattaaaagcaatttagataataagacgctt
cggatgattgcaaatacttgttttttagagtatagcatcactaattccgaagttgaagca
ctacttttagaagcacagttaatcaagaaatttcagccgaaatttaatattcttcttaag
gactgcaagtcttttcctttcattaagttacgtttagatcatgatttcccacaattacta
aaatatcgaggtaaaactctaagtgacgggaagttttttggtccttttgcctcgagtgcg
gaagttaatactactttgaccgaactacaaaaaatttttaaattacgttcctgcacggat
aattactttaattcacgtactcgcccttgcttacaatatgaaataaaacgttgttatgct
ccttgcgtcggtaaaataaacaaggaagactatagagacttagtaactcaggttaaagat
ttcttacaaggtcgcactaaagaactccaagagaacctatctagaaagatggaagagcta
agtagtcagatgcgttttgaagaggcggcagaaattagagatcgcattaaagcacttagt
tatgtgcagcttaaggcaggggtttcagatgtcgttaaagacgcagatataatcgctatt
gtggaaaagaacgggcattattgcgtggaagtgtttttatatagggcagggcaagcatgc
ggtaatattccttattttcctacttctaccgaaaatagtaccaaagaagaagtattagaa
tattttttattacaattttaccaaaaacaacacgtgcctgcggcaattataattaatcat
gaaattaatgataaagagaatgtgatagaggcgattaagaaaatcaacgatatacttcag
cttaatattacagtacctaataaaggcggtaaggctaaattagttcaaaatgctgagaca
aatgctttattttctctagagcagtatttgaagaaatttgcaaaaaatcaagagattatg
tttgaaattaaagagctatttggtctttctgaaattcctgaaagaattgagatttatgat
aatagccatattcaaggtaagtttgcggttggagtgatggtagttgctggtaaagtcggt
tttgataaaaaagaatatcgggtttttaatgtccatgctccctctctcgtatgtcattcc
cgtgaaagcggggatccaaaaaggttaatggattcctgctttcgcgggaatggcataaag
aactgcgggggtgacataaaaggtaacgattatgagatgctccggcaagtcctaacaagg
cggcttacaaggttaaggcaagagccgcataaattgccaagcttaatgattatagacggc
ggcaaagggcatttaggcgttgttaaagaggtgatggataaatttgaaatgaatattcct
tttgtttgtatgtcaaaaggagtagatagaaatgccggttttgaacagttccatgtgata
ggtaaggaagtatttactctagataagaatttgccggttatgaaatatttacaaatcttg
cgagatgaggcacataattttgccataaagaatcatagactaggtagatcacgtgctata
aaaatatcacgccttgacgatatagagggcgtaggtgaaactcgaaaaaaagcattactg
cattatttcggttcgtataaagcagtatgcgacgcaaccatatatgagcttgctaaagta
aatggtattaacaagttacttgctgagatgatttttaatgttttgcacagaaaaaactaa
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