Rhizoctonia solani: RhiXN_01292
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Entry
RhiXN_01292 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
Retrotrans_gag
Ty3_capsid
Asp_protease_2
RVP_2
gag-asp_proteas
MscS_porin
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
67023574
NCBI-ProteinID:
XP_043186934
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Position
16:complement(join(197748..198756,198840..200188))
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AA seq
785 aa
AA seq
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MATRSRMASQAQSPFNLGHLEPQLPPTSSVEYGKVSLEQVTQLLLGLLGQVERLEREIAE
IKEAGIETRTNVENISQTVDVVKDGLKSLQLQGPLTPEGNQPKAVEETPRPIPKTEPIGL
VSRGPFWSETTREIPGLAQPTPRRAAPPRVPSPPPSPRLRSPIGAPAPPPPAPVAAYPAP
VKVDHPDAYTGKIGSEAKQWLTRMLAWTRLNSRMFPTDQEVLSFLLMNMKDSAGAWAHPH
LDQLGSHRAIIQTVEGFKLEFLAAFGDPDATRAAERKITTLTQSGTCADYITKFRTLAME
LDWNDAALRGQFACGLHWEVSRQIATRKHRPQTLLELQNAALVIDNALQEERASHPPRDN
KSSKQPNPARGTSTGQSSTGSKKLSNDPNFVLEEERNCRRAAGACIKCGKMGHKFAECRT
GWKATPTEDKGKAKETAKIGKDSEYQSGKEISPLFTISIKPEKQAEHLEVLIDSGTTSSF
LHPRTAEALRLPLIDLPTPRTVTMLNGSSPQAGKIWKKVSLTFTFDGKKMTETFLICNTG
SHAAILGLKWLDAHNPEIDWNAQTLSFPHTPPEHVAIAKEEEADQTPLEGVPPEYHQYAK
VFREEEFNKLPPHRHYDIGIELTEEGPLNLPLYSMTNAKSTTLKDWLRDKLKAGKIRPSK
SSISSPVMFVPKKDGSRRLVVDYRCLNNRTKKNVYPLPRPDDLMAQLRGAKVFTKLDLRW
GYNNVRVKEGDEWKTAFRTKYGLYESLVMTFGLTNAPASFQHFMNDLFKDLLDVCVIIYL
DDILL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccgttcccggatggcctctcaagcccaatcccctttcaatttgggacacctg
gaaccccagcttccgccaacctcctctgtcgaatatggcaaggtctcccttgaacaagtc
acccaactcctcctcggcctactcggccaagttgagcgccttgagcgagaaattgctgag
atcaaggaagcagggattgagacccggacaaacgtcgaaaatatctcacaaaccgtcgat
gttgtcaaggatggtctcaagtccctccagctccaaggcccccttaccccagaagggaac
caacccaaggcagtggaagaaacgccacgccccataccaaaaaccgagcctattggattg
gttagcaggggacccttctggtcagaaacaactagggaaatcccaggtctcgcccagcct
accccaagaagagccgcacccccgcgagtcccgtctccccctccatctccgcgtctccga
tcccccattggagcacctgcccctcctccaccggctccagtcgccgcatatcctgccccg
gtcaaagtagaccacccagacgcctatacaggcaagattgggagtgaggccaaacagtgg
ctcacaaggatgttggcctggacccggctaaactcgcgcatgttccccacggaccaagaa
gtcctatctttccttctgatgaatatgaaggattccgcgggagcatgggcacacccacac
ctcgaccagcttggatcacaccgggcaatcatccaaacggttgagggattcaaattggag
tttttggcagcgttcggtgaccctgatgccacaagggccgccgagcggaagattaccacg
cttacccagtccggcacatgcgcggattatatcacaaagttcagaaccctggcaatggaa
ctggactggaacgacgcggccctccgaggccagtttgcctgcggcctccactgggaggtc
agccgccaaattgctacccgcaaacatcgtccccaaacactcctcgagctgcaaaacgca
gcgctcgttattgacaacgctctccaagaagagcgtgctagccacccgccgagggataat
aagtctagcaagcaacccaaccccgcaaggggaacgagtaccggccaatcaagtaccggt
tcaaagaaactctccaacgaccccaattttgtgttggaggaagaaaggaattgccgccgc
gccgctggcgcctgcatcaagtgcggcaaaatgggccacaagtttgcggaatgccgcaca
ggctggaaggctacccctactgaggacaaagggaaagccaaggaaaccgccaagattggc
aaagactccgagtaccaatcgggaaaagaaatttcccccctgttcacaatttcgattaaa
ccagagaagcaagcagaacacctagaagtcctgatagactcaggcaccacatcgtcattt
ctccacccccgtaccgctgaggcactacgcctacctctcatagatctcccaacaccccgc
accgtcactatgctcaatgggtcgagcccccaggctggcaaaatctggaaaaaggtgtca
ctaacctttacctttgatggcaagaaaatgactgagaccttccttatatgcaatacaggg
tctcatgctgccattctgggtttgaaatggttggacgcgcataatccagagattgattgg
aatgcacaaaccctctcctttccccatacaccaccagaacacgtggccattgccaaagag
gaggaagctgatcaaacaccccttgaaggagtacccccagaataccaccagtatgccaaa
gtattcagggaggaagaattcaacaagcttcccccacaccggcactacgacattgggatt
gaactcacggaggaaggccccctcaatttgcctctctatagtatgaccaatgccaagtcc
actacgctcaaggactggctcagggacaaactcaaggcgggcaaaatacgccctagcaag
tcttccatcagttcccccgtgatgtttgttcctaaaaaggacggctcccgtcgcttggtt
gttgactaccgctgcctgaataaccggaccaaaaagaacgtttacccgttaccccgtcct
gatgacctcatggcccagctccgtggcgccaaggtcttcaccaaactagatctaagatgg
ggttacaataacgtccgggttaaggaaggtgacgaatggaaaaccgcgttccgcaccaag
tacggcctgtacgaatcccttgtcatgacctttggcttaaccaacgccccggcatcattc
caacattttatgaatgatttgtttaaggacctgcttgatgtatgcgtcatcatatacctt
gatgacatcctattatag
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