Rhizoctonia solani: RhiXN_02512
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Entry
RhiXN_02512 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH_2
RT_RNaseH
Integrase_H2C2
Chromo
Retrotrans_gag
RVP_2
gag-asp_proteas
Ty3_capsid
Asp_protease_2
rve
zf-H2C2
zf-CCHC_3
Asp_protease
NPV_P10
Motif
Other DBs
NCBI-GeneID:
67024792
NCBI-ProteinID:
XP_043177825
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All DBs
Position
3:join(440760..441920,441974..445360)
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AA seq
1515 aa
AA seq
DB search
MEPEPTLSALLKAITALTTQVGSLQDQVKSQGKQISQLTAICKETNDLVGDKDQGGAQTK
PGPSTGPVTPPTHSGGETHTPGTVRPGLKALFRPSRGTGFDSEDEEEPRIPKKEPQGTPK
RHLGSLTPFDAGSSVKRPKMDLPDPYKGDTRGRKATQWLDRMMLWVALHRDQFDEEEQMV
VWILYHMTDKAANWALPIIGNIIKGKGNPPTTIQALTGKFKEAFANPDAKRAAARKIAAL
TQTTTTSEYVTEFRNLMAELDWNTEAYIAQFTRGLHWKVKELLSTKDNVPDNDLKAIFAA
SVKIDNTRWENEENRPKKAPTKAPVATTTSTSTTTTRVRLSKDPNYVTPEERDRRRASGL
CVKCSQKGHGIKQCPNGWKATIKEVAKPLANPSVHVSECEFVSVALDSNKKPLLFIDLQL
HKFPTENLKTLIDSGATSNFISPTIVEKLKIPKTLLKNPRVVRMLDGTLSQTGRIWHQVN
LTVLANGHTHTIPFLVCPIGNTSAILGMTWLTQESPLIDWSLGTVTFPEQIQIASKEEAD
PDPLADLPEQYHEFAKVFGKEEFKVLPPHREYDISIDLVPDAKLPPGPLYGMTDAESKAL
KQHIDEELATGKIRPSTSSTGAPVMFVKKADGSLRLVVDYRKLNDVTHKNVYPLPRQDDL
MAKLRHAKIFTKLDLRWGYNNVRVREGDEWKTAFRTKYGLFEYLVMPFGLTNAPAAFQHF
MNDLFRDLIDVTVVIYLDDILIFSKKPEDHPTHVREVLSQLMRNQLFCKLSKCHFHVTTV
DYLGIVISPAGFSMDQKKIEAVTTWPTPKTVKQVQAFLGFVNYLRRFIPNFSSVARPLHN
LTKKDSPWSWDVLEEQAFQELKALVTKAPVLIHLNPNLPYYLETDASGVAMGAILSQRGE
DNRLHPVAYMSKSFSSAKANYDTHDKELLAIIKALEEWRIFLEATDRPIQVFTDHRNLEY
WMQARTFNRRHARWRIFLSNFNFEIHYRPGKQSGKPDALSRRSDYIDSPVEPEVMLPSEV
FANTSEAELEIVTKIRDRLREDPSLEPIIQFLTEDADNAPPSIWKAYWDYDWEEDLLWYC
GKLVVPDSEPLKEQLLREFHNSPLAGHPGQQRTLKLISRSYWWPGMKSSAKEWVKCCPIC
QANRRAHTPAIALKPLEVPPFPFHTILYDFITGFPKSNGYDAILVVIDSFSKFGHFIPTT
KKVMAKGLADLFITHVWKLHGLPIKTVLDCGTTFTGKFLRALYQRLGIKPAFSSAYHPES
DGQTERVNQFIEFYLRSYVTADHSDWATWLPLAEYAYNNARHSATGKTPFELVYGRNPVM
SPSNVPTNIPEADHVADTLAQEWKEAESALQMTKEKMAELKGATLEYSIGKKVWLDGKNV
ELQTNSNKLDPRRLGPFEILEKISSHAYCLKLPETLKIHNVFYVGLLSKVHKSPSQPFPE
RPPPETIEGEEEYKVEQIIDSKRQRGKWFYLIKWKGYGPKDNSWEPEELLEHSQEEIQRF
NKLRLKKACDSAKSL
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atggaaccggagccgacccttagcgctctcctcaaggctatcacagccctcaccactcaa
gtcgggtccctccaggaccaagtcaagtctcaaggcaagcaaatctcccagcttaccgcc
atatgcaaggagaccaacgaccttgttggagacaaggatcagggcggagcccaaaccaag
cctggcccatcaactgggcctgtcaccccccctacccactcagggggagaaacccacact
ccaggcacggttaggcctggactcaaggccctgttccggccctctagaggcacgggcttt
gactctgaggatgaagaggaaccaaggatccccaaaaaggagcctcaaggaacgcctaaa
cggcaccttgggtcccttaccccctttgatgccgggtccagcgtaaaaaggcccaagatg
gacctcccagacccctataaaggagatacaaggggacgtaaggccacccaatggcttgac
cgcatgatgctctgggtcgccctccacagggaccaatttgatgaagaggaacagatggtt
gtatggatcctctaccatatgactgataaagctgccaactgggcccttcccatcattggg
aacatcatcaagggcaaaggaaatccccccaccaccatccaggcccttacgggcaaattc
aaagaagccttcgccaatccagacgcaaagagggcggccgccaggaagattgccgcgtta
actcagaccaccaccacatctgagtacgtcacagaattccgcaacctcatggcggaatta
gactggaacactgaggcgtacattgcccagtttacgcgcggccttcactggaaggtcaag
gaactcctgtccaccaaggacaacgtccctgacaatgacctcaaggccatatttgccgcc
tcggtcaaaattgataacactcgttgggaaaatgaggagaaccgccccaaaaaggctcct
accaaggccccggttgccacgaccacctctacctccaccactaccacaagggtccgccta
tccaaggaccccaactacgtcaccccggaagaaagggaccgccgccgcgcgtctggcctt
tgcgtcaagtgcagccaaaaagggcatggcatcaaacaatgccctaatggttggaaagcc
acgatcaaggaggtggccaagcccctggccaatccaagcgtgcatgtatcagaatgtgaa
tttgtatctgtggctctagattccaataaaaagcccctattatttattgatttacaactg
cacaaattcccgacggaaaacctaaaaaccctaatagactcaggagccacctccaatttc
atctcccccaccattgtcgaaaaacttaaaataccaaaaaccctgctcaaaaatccacga
gtagtgagaatgttagatggtaccctatcccagactggtcgcatttggcaccaggttaac
ctcacggtcttggccaatggccatacccataccattccattccttgtctgtcccattggg
aacacatccgccatactcggcatgacatggctcactcaggagtcacccttaattgattgg
tccctaggcacggttaccttccctgaacaaattcagattgcatccaaagaagaggcagac
cctgaccccttagccgaccttccggaacagtaccatgagtttgccaaagtctttggcaaa
gaggaattcaaggtcctccctccacacagggagtatgacatatccatagatcttgttccg
gatgccaaactacccccaggtcccctttatggcatgactgacgcggaatccaaagccctc
aaacaacatattgacgaagaactagcaacgggcaagatccgccccagtacttcctctact
ggcgccccagtcatgtttgtaaaaaaggcagacggatcccttagactggttgtggactac
cgaaaactcaatgacgtcactcacaagaacgtgtacccactcccaagacaggacgacctg
atggccaagttaagacatgccaaaatattcacaaagctcgacctgcgctggggttacaac
aacgtcagagtcagagaaggggatgaatggaaaacagcgttcaggactaaatatgggctg
tttgaatatctagtgatgccttttggccttaccaacgccccagccgccttccaacacttc
atgaacgacctgttcagagacctcattgatgtcacggtggttatctatttggatgacata
ctgatcttctccaagaagcctgaggatcaccctacccatgtcagggaagtcctttcacaa
ttgatgaggaaccagttgttctgtaaactctccaaatgccacttccatgtcacaacggtg
gactaccttggtattgtcatttccccagctgggttctcaatggaccaaaagaagatcgag
gctgttaccacctggcccacacccaaaacagtcaaacaggtccaggccttcctaggtttt
gttaattacctcaggcgtttcatccccaacttcagctccgttgcacgccccttacacaac
ctcaccaaaaaggattctccgtggtcatgggacgtgttggaagaacaggctttccaggaa
ctcaaagcattggtcaccaaagcaccggttctgatccacttgaaccccaatttgccttac
tacctggaaacagacgcgtcaggggtagccatgggagcaatccttagtcaaagaggggag
gataaccgcttacacccagtggcttacatgtctaaatctttctccagcgccaaggctaat
tatgacacccatgacaaggaactcctggccataatcaaggcattagaggaatggcggatc
ttccttgaggcaacggacagaccaatccaggtgttcacagaccatagaaacctggaatat
tggatgcaggcacggacgttcaacagaaggcatgcacgttggcggattttcctgagcaat
ttcaactttgaaatacactatcgcccagggaaacaatcaggaaaacccgacgccctttcc
agaaggtcagactacatagattccccagtagaaccagaagtcatgctaccgtcggaggtt
tttgctaatacatcagaggcggaacttgagattgtcacgaaaatccgggacaggttaagg
gaagacccttccctggaacccatcatccagttcctaacggaggacgcagacaatgcaccc
ccctctatttggaaagcctattgggattatgactgggaagaggacctcctatggtattgc
gggaaactagtggtaccggactcagaaccccttaaagaacaactgctaagagaattccac
aattccccactggcgggccacccaggacaacaaagaacactcaaactgatcagtaggtcc
tactggtggcctggtatgaagtcctcagcaaaagaatgggtcaagtgctgtccaatatgc
caagcaaatcgaagagcccacacgccggcaattgccctgaaacccctagaagtcccacca
tttcctttccacaccatcttgtatgacttcatcacaggattcccaaagtcaaatgggtat
gacgcaatcttggtggtcattgactccttttccaaatttggacacttcatccctaccaca
aagaaagtcatggctaagggtctggcagacctgttcatcacgcatgtctggaagcttcat
ggattgccaatcaagacagtcttggactgcggaaccaccttcactgggaaattcctgaga
gccctctaccaacgtcttgggatcaaacccgctttctcctcggcctatcatccagaatca
gatggacagacggaaagggtgaatcaattcatcgagttctacctcagatcttatgtcaca
gcggaccactcggactgggctacctggttgccattggcagaatacgcctacaacaatgct
agacattccgccaccggaaaaaccccctttgagttagtttacggaagaaatcccgtgatg
agcccatccaacgtgccaacaaacataccagaagctgaccacgtggctgataccctggcc
caggaatggaaagaggcagaatccgctctacaaatgacaaaggaaaaaatggcagaatta
aaaggagccacactggagtactccattggcaaaaaagtctggctggacggaaaaaatgtg
gaactacaaaccaactccaataaactagacccaaggaggttaggaccatttgaaatccta
gaaaagatctccagccacgcttattgtctaaaattaccggagaccctgaagatccacaac
gtattctacgtagggctattgtccaaagtccacaaaagcccaagccagccattcccagag
cgacctccccctgaaacaatagagggagaagaggaatacaaggtagaacaaatcattgac
tccaaaagacaacggggtaaatggttttacttgatcaaatggaaaggatatggacccaaa
gataactcatgggagccagaggagctacttgagcatagtcaggaggagatccaacgcttc
aacaagttgcgactgaaaaaggcttgtgactccgccaagagcctttaa
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