Rhizoctonia solani: RhiXN_02705
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Entry
RhiXN_02705 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
Integrase_H2C2
RT_RNaseH
RT_RNaseH_2
Chromo
Retrotrans_gag
RVP_2
Ty3_capsid
gag-asp_proteas
rve
zf-H2C2
Asp_protease_2
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
67024985
NCBI-ProteinID:
XP_043178018
LinkDB
All DBs
Position
3:complement(join(1011242..1013043,1013104..1014631,1014685..1015343,1015401..1015997,1016076..1016079))
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AA seq
1529 aa
AA seq
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MSTFPHTVFTIPSTRSGVPHPYSCPSSRSSQRSVATRSQPPSCGPSPPPQHLPGMEPEPT
TAALLKAILNLTNQVGSLQAQISSQGQQLAELKAICKETNNLVGDKDQGGAQTKPGPSTG
PVTPPTHSGGEAHTPGTVRPGLKAPFRPSRGTGFDLEDKEPRLPKKEPQGTPRRHLGSLT
PFDAGSSVKQPKMDLPDPYKALHCNQFDKEEQMVVWILYHMTDKAANWALPIIGNIIKGK
GNPPTTIQALTAKFKEAFADPNAKQAAARKIAALSQSTTTSKYVTEFRNLMAELDWNKEA
YIAQFMQGLHWKVKELLSTKDSIPNNLKAIFAAAIKIDNIRCKNEENQPKKVPAKSPAPT
ATTSTTTTQQVRLSEDPNYVTPEERDCCRASGLCVKCGQKGHGIKQCPNGWKATIKEVAK
PPTQKTDNIVDSVEFVNLGLDSNKKPLLFINIYIQNVPAEPLRTLIDSGATLNFISPLIV
EKYKIPKTQLKNPRVVRMLDGTISQTGCIWHQVHLTVLANSHPHSIPFLVCPIGNTPAIL
GMTWLTTEAPLIDWQQGLITFPEQAQIASEEEADLDPLADLPLQYHEFAKVFGKEEFKVL
PPHREYDISIDLVPDAKLPPGPLYGMTDAESKALKQHIDKELATGKIRPSTSSTGAPVMF
VKKADRSLRLVVDYWKLNEVTHKNVYPLPRQDNLMAKLRHAKIFTKLDLRWGYNNVRIKE
GDKWKTAFRTKYGLFEYLVMPFGLTNAPAAFQHFMNNLFRDLINVTVVIYLDNILIFSEN
PKDHPTHVREVLSRLMRNQLFCKLSKCHFHATTVDYLGIVISLAGFSMDQKKIEAVTSWP
TPKTVKQVQAFLGFVNYLCRFIPNFSSVARPLHNLTRKETPWSWGDLEEAAFQELKVLVT
KLPVLIHSNPELPYYLETDASGVAMGAILRAEGNYNTHNKELLAIIKALEEWRIFLEATD
KPVQVFTDHRNLEYWMQARTFNQRHARWCVFLSDFNFEIHYCPGKQSGKPDALSRQSDYV
DNPQEPEVMLLPEVFANTVEEELEIVTEICAKLKEDPSLEPIIKFLTEDADNAPPSIRKA
YRDYDWEEDLLWYRGKLVVPDSEPLKEQLLREFHNSPLAGHPGQQRTLELISRSYWWPGM
KSSAKEWVECCPVCQANQRAHAPAISLKPLEVPPYPFHTISYDFITGFPKSQGHNAILVV
INSFLKFGHFIPTSKKVTSKGLADLFVNHVWKLHGLPIKTISDRGTTFTGKFLRALYQQL
GIKPAFSSAYHPESDGQTERVNQFIEFYLRLYVAADHSDWATWLPLAEYAYNNAKHSATG
KTPFELVYGRNLVMNPSNVPANVPEADLVADTLAQEWKEAESALKMTKERMAGVKGTTPE
YYIGEKVWLDAKNVEIQSNSNKLDPKRLGPFEVTKKISSHAYRLKLPESLKIHDVFYVGL
LSKSHKSPNQPFPERPPPETIRGEEEYKVEQIIDSKRQQGKWFYLIKWKGYGPEDNSWEP
EELLENSQEEIRCFNKSQLRKACDSAKSL
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccttcccccacaccgtcttcacaattccatccacacgctctggcgtcccacac
ccatactcctgtccctccagccgctcctctcaacgttccgtggcaacccgctcccaacca
ccctcttgcggcccatcaccccctccacaacacttgcccggaatggaaccggagccaacc
actgccgctctcctcaaggctatcctcaacctcaccaaccaagttgggtccttgcaggcc
caaatatcatcccaaggacaacagcttgcagagctcaaagccatatgcaaggaaaccaac
aaccttgttggtgacaaagaccagggcggagcccaaaccaagcctggcccatcgactggg
cctgtcacccctcctacccactcagggggggaagctcacactccaggcacggttaggcct
gggctcaaagccccattccgcccctcaagaggaacaggttttgacttggaggacaaagaa
ccaaggctccccaaaaaggagcctcaaggaacacctagaaggcacttgggatctctcacc
ccctttgacgcagggtccagcgtaaaacaacccaagatggatctccccgacccctataag
gctctccattgcaatcagtttgacaaggaagagcagatggttgtgtggattttataccac
atgacagacaaggccgccaactgggccctccccatcattgggaatatcatcaagggcaag
ggtaaccctcctaccaccatccaggccctaacagccaaattcaaggaagcctttgccgat
cccaacgccaaacaggctgccgccagaaaaattgcggctctttcccaatccaccaccacc
tccaagtacgtcacggagttccgcaatctcatggcggagctagactggaacaaggaggcc
tacattgcgcagttcatgcagggcctccactggaaggtcaaggaactgctgtctaccaaa
gatagcatccccaacaatctcaaagccatctttgcggcggcaattaaaattgacaacatc
cgctgcaaaaatgaggaaaaccaaccaaagaaggttcctgccaaatccccggcccccacg
gccaccacctccactaccaccactcaacaggtccgattatcagaggatcccaattacgtt
accccggaggaaagggattgctgccgcgcgtctggcctttgtgtcaagtgcggtcaaaaa
ggacatggcatcaaacagtgccctaatggttggaaggcaacaatcaaggaggtagccaag
cccccaactcagaaaacagacaatatagtagatagcgttgaatttgtaaatcttggtcta
gactcaaataaaaaaccgcttctttttatcaatatatatatccaaaatgtcccggcagaa
ccccttagaaccctcattgactcaggagccacattgaatttcatctcccccttgattgtg
gagaaatacaaaatcccaaaaacccaactcaaaaatccacgagttgtgagaatgttagat
ggtactatatcccagactggttgcatttggcaccaggttcacctcacggttttggccaac
agccacccccactccattccctttcttgtctgccccattggcaacaccccggcaatcctt
ggcatgacttggttaacaacagaagctccccttattgactggcaacagggactgatcacc
ttccctgaacaagcacagattgcctctgaggaagaagcagacctagatcctttggcagac
ctccctcttcagtaccatgaatttgctaaagtgtttggcaaggaagaatttaaggtcctc
cctccacatagggagtatgatatatccatagaccttgtcccggatgctaaactacccccg
ggacccttatatggcatgactgatgctgaatccaaggcgctcaagcagcacattgacaaa
gaattagcaacgggcaagatccgccccagcacttcttccactggcgccccagtcatgttt
gttaagaaggcggacagatctcttaggctggttgtggattactggaaactcaatgaggta
acccacaaaaatgtatatccactcccaagacaggacaaccttatggcaaaactgagacat
gctaagatattcacaaagcttgatctacgctggggctataacaatgtcaggattaaggaa
ggagacaaatggaagacggcttttagaacaaagtacgggctatttgaatacctggtgatg
ccctttggccttaccaatgcccctgccgccttccaacacttcatgaacaacctgttcagg
gacctcatcaacgtcactgtggttatctacttggacaacatcctgatcttctcagagaac
cctaaggaccacccaacccatgtcagggaagtcctatcacggctaatgaggaaccagttg
ttctgtaaactctccaagtgccacttccatgccaccacggtggactacttgggtattgtt
atttccctggcaggcttttccatggatcagaagaagattgaggcggtcacgtcatggcca
acccccaaaacagtcaagcaggtccaagccttcctaggatttgtcaactacctttgccga
ttcatccccaatttcagttcagtagcacgccctctgcacaaccttaccagaaaggaaacc
ccctggtcatggggcgacctagaggaagcagcatttcaggagttgaaggttctggtcacc
aagttgccggttctcatccattccaacccagaactcccctattaccttgagacagacgcc
tcaggggttgccatgggagccatccttagggcagaaggaaactacaacactcacaacaag
gaactcctggccatcatcaaggccttggaggaatggcgtattttcctggaagctacggac
aagccggttcaggtatttacagaccaccgcaaccttgagtactggatgcaagcaaggaca
ttcaatcaacggcatgctagatggtgtgtattcctgagcgatttcaattttgaaatacat
tattgtccagggaagcaatcagggaagccggatgccttgtccagacaatcagactacgtt
gacaacccccaagaaccagaagtcatgctactgccagaggtttttgcaaatacagtagaa
gaggaattagaaattgtcacagagatttgcgccaagctcaaggaagatccatcactggaa
ccaattatcaagttccttactgaggacgcagacaacgcgcccccctcaattaggaaggcc
tatagggactatgattgggaagaagacttgctatggtaccgcgggaaactggtggttccg
gactcagaacccctgaaagaacaactattgagggaattccacaactccccactggcagga
catccaggccaacaaaggacgcttgaacttatcagcaggagctattggtggcctggaatg
aaatcttctgctaaggaatgggttgaatgctgtccagtttgtcaagccaaccaacgcgcg
catgccccagctatctccctgaagcccttagaagttcccccttatcctttccacaccata
tcctatgacttcatcacaggtttccccaaatcccagggacacaacgccatactggttgta
atcaattcctttttgaaatttggtcacttcattcccacctcaaaaaaggtcacatcaaag
ggtctagcggacttatttgtcaaccatgtctggaaattacatgggctacccataaaaacc
atctctgatagaggtaccacgtttaccgggaagttcctcagggcactataccaacaactt
ggaattaagcctgccttctcgtcggcctatcacccggaatcagacggtcaaacggaaagg
gtcaaccagttcatagagttctacctcagattgtatgtggctgcagatcactcagattgg
gccacatggttgccactggctgaatatgcatataacaatgccaagcattctgccacagga
aaaaccccttttgaactagtttatggaagaaacctggtaatgaacccatccaacgtccca
gcaaacgtcccagaagcagaccttgtagcagacacccttgcacaggagtggaaggaagca
gaatccgctttaaagatgacaaaggaaagaatggcaggagtgaaaggcacaaccccagaa
tactatattggggaaaaagtatggctagacgcaaagaatgtggagattcaatccaactcc
aacaaattagaccccaagcgcctaggaccttttgaagtcaccaagaagatctcaagccac
gcataccgcctaaagctccctgagtcactgaagatccatgatgttttttacgtaggacta
ctctccaaaagccacaaatcaccaaaccagccattcccagaacgccctcctcctgaaaca
ataagaggagaggaagaatacaaggtggaacagatcatagattccaagaggcaacaaggg
aaatggttctacctaatcaaatggaaaggatatgggccagaagacaactcctgggaacca
gaggaactactggaaaacagtcaagaggaaatccgttgcttcaacaagtcacaactgaga
aaggcttgtgactccgccaagagcctttaa
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integrated database retrieval system
