Rhizoctonia solani: RhiXN_02887
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Entry
RhiXN_02887 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH
RT_RNaseH_2
Integrase_H2C2
Chromo
gag-asp_proteas
RVP_2
rve
Asp_protease_2
zf-H2C2
Motif
Other DBs
NCBI-GeneID:
67025167
NCBI-ProteinID:
XP_043178200
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Position
3:complement(1539095..1542427)
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AA seq
1110 aa
AA seq
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MDSNKKPLLFLDIILRDYPTDPIKTLIDSGATSNFISPSLVEKLKIPKTLLENPRVVRML
DGTLSQTGCIWHQVQLAVLANGHPHNIPFLVCPLGNTSAILGMTWLTTESPLIDWQQGLI
TFPEQAQIASEEEADLDPLADLPPQYHEFAKVFGEEEFKVLPPHREYDISIDLVLDAKLS
PGPLYGMTDAESKALKQHIDKELATGKIHPSTSSTGAPVMFVKKADGSLRLVVDYQKLND
VTHKNVYPLPRQDNLMAKLRHAKIFTKLDLRWGYNNVRIKEGDEWKTAFRTKYGLFEYLV
MPFGLTNAPAAFQHFMNNLFRDLIDVTVVIYLDNILIFSEDLKDHPTHVREVLSWLMRNQ
LFCKLSKCHFHVTTVDYLGIVISPAGFSMDQKKIEAVTSWPTPKTVKQVQAFLGFVNYLC
RFIPNFSSVARPLHNLTRKETPWSWGDLEEAAFQELKILVTKLPVLIHSNPGLPYYLETD
ASGVAMGAILSQRGPDNQLHPIAYMSKSFSGAEGNYNTHNKELLAIIKALEEWRIFLEAT
DKPVQVFTDHRNLEYWMQARTFNQRHARWRVFLSNFNFEIHYRPGKQSGKPDALSRRLDY
VDNPQEPEVMLPPEVFANTAEEELEIVMDICAKLKEDPSLEPIIKFLTEDADNAPPSIRK
AYRDYDWEEDLLWYRGKLVVPDSEPLKERLLREFHNSPLAGHPGQQRTLELISRSYWWPG
MKSSAKEWVECCPVCQANRRAHAPAISLKPLEVPPYPFHTISYDFITGFPKSQGHNAILV
VIDSFSKFGHFIPTLKKVTSKGLADLIVNHVWKLHGLPIKTISDRGTTFTGKFLRALYQQ
LGIKPAFSLAYHPESDGQTERVNQFIEFYLRLYVAADHSDWATWLLLAEYAYNNAKHSAT
GKTPFELVYGRNLVMNPSNVPANVPEADLVADTLAQEWKEAESALRMTKERMAGVKGTTP
EYTIGEKVWLDAKNVEIQSNSNKLDPKRLGPFEVTKKISSHAYRLKLPESLKIHDVFYIG
LLSKSHKSPNQPFLERPPPETIRGEEEYEVEQIIDSKRQRGKWFYLIKWKGYRPEDNSWE
PEELLEHSQEEIRCFNKSQLKKACDSAKSL
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaacaaaaaacccctcctctttttagacataatactgcgtgactatccgacg
gaccccatcaaaaccctcattgactctggcgccacctccaacttcatctccccctcttta
gtagaaaaactcaaaatcccaaaaaccctactcgaaaatccacgagtagtgagaatgcta
gatggtaccctatctcagactggttgcatatggcaccaggttcaactcgcggtcttggcc
aatggccatccccacaatatcccctttcttgtctgtccccttggcaacacctcggcaatc
cttggcatgacctggctcacaacggaatcccccctcattgactggcaacagggactgatc
accttccctgagcaagcacagattgcctctgaggaagaagcagacctagatcctttggca
gaccttcctccgcagtaccatgaatttgctaaagtctttggtgaggaagaatttaaggtc
ctccctccacatagggagtatgatatatccatagaccttgtcctggatgccaaactatcc
ccaggacccttatatggcatgactgatgctgaatccaaggcgctcaaacagcacattgac
aaagaattagcaacgggcaagatccaccccagcacttcttccactggcgccccagtcatg
tttgttaagaaagcagacggatctcttaggctggttgtggattaccagaaactcaatgac
gtaacccacaaaaatgtatatccactcccaagacaggacaacctcatggcaaagctgaga
catgctaagatattcacaaagcttgatctacgctggggttataacaacgtccggattaag
gaaggagacgaatggaagacggcttttagaacaaagtacgggctatttgaatacctggtg
atgccctttggcctcaccaatgcccccgccgccttccaacacttcatgaacaacctgttt
agggacctcattgacgtcactgtggtcatctacttggacaacatcctgatcttctcagag
gaccttaaggaccacccaacccatgtcagggaagtcctatcatggttaatgaggaatcag
ttgttctgtaaactctccaagtgccatttccatgtcaccacagtggattacttgggtatt
gtcatttccccggcaggcttttccatggatcagaagaagattgaggcagtcacgtcatgg
ccaacccccaaaacagtcaagcaggtccaagccttcctaggatttgtcaactacctctgc
cgattcatccccaacttcagttcagtagcacgtcccctgcacaaccttactagaaaggaa
accccctggtcatggggcgacctagaggaagcagcatttcaggaattgaagattcttgtc
accaagttgccggttctcatccattccaacccagggctcccctattaccttgagacagac
gcctcaggggttgccatgggagccatccttagtcagcggggcccagataaccaactacac
ccaattgcgtatatgtccaagtcattctcaggggcagaaggaaactacaacacccacaac
aaggaactcctggccatcatcaaggccttggaagaatggcgtattttcctggaagctacg
gacaagccggttcaggtattcacagatcaccgcaaccttgagtactggatgcaggcaagg
acattcaatcaacggcatgctagatggcgtgtattcctgagcaatttcaactttgaaata
cattatcgcccagggaagcaatcagggaagccagatgccttgtccagacgattggactat
gttgacaacccccaagaaccagaagtcatgttaccaccagaggtttttgcgaatacagcg
gaagaggaattagaaatagtcatggatatttgcgccaagctcaaggaagacccatcactg
gaaccaattatcaaattccttactgaggatgcagacaacgcgcccccttcaattaggaag
gcctatagggactatgattgggaagaagatttgctatggtatcgcgggaaactggtggtt
ccggactcagaacccctgaaagaacgactcctgagggaattccacaactccccactggca
ggacatccaggccaacaaaggacgcttgaacttatcagcagaagctattggtggcccgga
atgaaatcctctgctaaagaatgggttgaatgctgtccagtttgtcaagccaaccgacgc
gcgcacgccccagctatctccctgaaacccttagaagttcccccttatcctttccacacc
atatcctatgacttcatcacaggattccccaaatcccagggacacaacgccatactggtt
gtaattgattccttttcaaaatttggccatttcattcccaccttgaaaaaggtcacatca
aagggtttagcggacttaattgtcaaccacgtctggaagttacatgggctacccataaaa
accatctctgatagaggtaccacgttcaccgggaagttcctcagggcactataccaacaa
cttggaatcaagcccgcattctcattggcctatcacccggaatcagatggtcaaacggaa
agggtcaaccagttcatagagttctacctcagattgtatgtggctgcagatcactcagat
tgggccacatggttgctgctggctgaatatgcatacaataacgccaagcattctgccaca
gggaaaaccccttttgaactagtttatggaagaaacctggtaatgaacccatccaacgtc
ccagcaaacgtcccagaagcagaccttgtagcggacacccttgcacaggaatggaaggag
gcagaatctgctttaaggatgacaaaggaaagaatggcaggagtaaaaggcacgacccca
gaatacactattggggaaaaagtatggctagacgcaaaaaatgtggagattcaatccaac
tccaacaaattagaccccaagcgcctaggtccttttgaagtcaccaagaagatctcaagc
cacgcttaccgcctaaagctccctgaatcattgaagatccatgatgttttctacatagga
ctactttccaaaagccacaaatcaccaaaccagccattcctggaacgtccccctcctgaa
acaataagaggagaggaagaatacgaggtggaacagatcatagattccaagaggcaacga
ggaaagtggttctacctaatcaaatggaaagggtacaggccagaagacaactcttgggaa
ccagaggaactactggaacatagccaagaggaaatccgttgcttcaacaagtcacaactg
aaaaaggcttgtgactctgccaagagcctttaa
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