Rhizoctonia solani: RhiXN_03442
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Entry
RhiXN_03442 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH_2
RVT_1
RT_RNaseH
Integrase_H2C2
Retrotrans_gag
Chromo
rve
Ty3_capsid
Asp_protease_2
gag-asp_proteas
RVP_2
DUF4939
zf-H2C2
Motif
Other DBs
NCBI-GeneID:
67025722
NCBI-ProteinID:
XP_043178755
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Position
3:complement(join(3230999..3234434,3234458..3235779))
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AA seq
1585 aa
AA seq
DB search
MATRSWSSACPSSPLNQGELGPTLPATAVESSSLEPKVYGEISLGQAISLILGLQNQILR
LEQELKETKEATKEAQDWMGAVDQALTCIEARGGAPHTPEDRKPLAIKATPRPLSKTDTF
PAPSAPLVAWAAPSKAPPAFAQPTPVRAPPRVHTPPPPLPIRLRSPQVPAAPVAAYQTPV
KVDHPDAYTGKIGNKARQWLTRMLAWVHLNQRMFPTDQEVLSFLLMNMKDAAGAWAHPHL
DQLGSHRALIQLVDDFRTEFLAAFGNPDATQAAERQITHLTQTGSCAEYITKFRTIAMDL
DWNDAALRGQFARGLHWEVSRLIATQERRPTTLLELQNVAMVINNALREERASHPPKGNK
PGTSSTTPNRGASTGQPATRPGRLSSDPNFVSEEEQNRRRAKGLCIKCSKMGHKFAECRT
GWKATPKEEGVKKEAAKIGKELRVPAAARKDPKDSGLIEICNISNSINRISPLFTISIKP
EKQADPLEVLIDSGATSLFLHPHTAELLRLPLIDLPQPRTVTMLDGLSPQAGKIWKKAHL
TFLFDGKQMTETFLICNTGSHAAILGIKWLEAHNPEINWNSRTLSFPHTPPEHATIAEEE
EADQKPLEGVPSKYHQYAKVFGEEEFNKLPPHRHYDIGIKLTEEGPLNSPLYSMTDAKSA
TLKDWLKDELKAGKIRPSKSPISSPVMFVPKKDGSRCLVVDYCCLNNRTKKNVYPLPCPD
DLMAQLRGAKIFTKLDLRWGYNNVRVKEGDKWKTAFRTKYGLYESLVMTFGLTNAPAAFQ
HFMNKLFKDLLDVCVIIYLDDILIYSKDDATHTKHVHEVLKRLMDNQLFCKASKCTFHVT
SVEYLGIIVSDKGFSLDKLKIQAVQEWPVPTKVKEVQSFLGFANFLRRFVANFSHMARPL
HNLVRKDTTWKWDTREQEAFQSLKDAITNAPVLCHADPTKPYFLETDASGAALGSILSQR
QEDGRLHPLGFLSELFKGAKQNYDTHDKELLAIIRSFEYWRIFLEGTKHPITVFTDHCNL
EYWKESRTFNQQHAQWHLLLAGYNFQIVYCPGKQSGKPDALSRQSDHANIPPAVQTMLPD
PVFANIALVTPEKELQRQIKASLDQDESLEEILQFLQNESKAPPSIKRAFKDYKMEAGLL
FYQGRIVVPDVGTLRTDLLHIFHDSPLAGHPGRQRTLELVSRNYYWPGIRADTYWHVDSC
ETCQRIRKPKYASIPPQPLELPVRPWQHVSYDMIVDLPKDRSNNSILVIVDSFTKYGIFV
KCSKKLKAPELAELFLEHVWKRHGMPEKTVSDRGRVFNNKFLKALYKCLGIDPHFSSAYH
PQSDGQTEQVNPSIKHFLRAYLGVNQRDWTKWLPMAEFAYNNAVHSSTGKTPFKALYGWE
PTLTPSNVPTDVPEADKLAQTMEAQWKEVESALRQAKQRMTARESGSPTEFKIGEEAWLD
AKNVNLKTLSPKLTEQRLGPFKVTKKISDRAYRLELPPTMRIHNVFYVGLLSKVKRDNKR
AFKNRPPPVTVDGEEEYEVEGITNAEERNGKWFFRVKWKGYGSKENTWEPQENLKNAEKI
LEKYEKEMKKKALGAAKALKGGAVL
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccgctcctggagctccgcttgtccctcatcccctctcaatcaaggagagctg
ggacccactcttccggcaaccgccgttgagtcatcaagccttgaacccaaggtctacggg
gaaatctcccttggacaagcaatctcccttatcctgggattgcaaaatcaaatcctccga
cttgagcaagaactcaaagaaacaaaggaagccacaaaggaagcccaagactggatgggc
gcagtcgatcaagccctcacttgcattgaggctaggggtggagccccccacacaccagaa
gaccggaaacctctggcaatcaaggccacgcccaggcccctatccaaaaccgacactttt
ccagcgcctagtgcgccccttgttgcctgggccgccccctccaaagctccccccgccttc
gcgcaaccaactcccgtccgggctcccccgcgagtccatactccccctccacctttgcct
atccgcctccgttccccccaagtaccagcggcccctgtagccgcttatcaaacccctgtc
aaggtagaccaccctgacgcctatacggggaaaattgggaacaaagcccgccaatggctc
acgcggatgttggcatgggtacatctaaaccaacggatgttcccaaccgatcaggaggtc
ctgtcattcctcctgatgaatatgaaggacgcagcaggagcctgggctcacccccatctc
gaccaactagggtcccacagggccttaattcaattggttgacgacttcaggacggagttc
ttggctgcatttggcaacccagatgctacgcaagccgccgagcggcaaatcacccacctt
actcagacaggctcctgtgctgagtacattacaaagttcagaaccatcgccatggacctg
gactggaatgacgccgcccttcgtgggcaatttgcacgtggcctccactgggaggtcagc
cgtctcatcgccactcaagaacggcgccccaccaccctcctcgagctacagaacgtagcc
atggtcatcaataacgccctccgcgaggagcgtgccagccacccgcctaagggtaataag
cctggaacctcttctactacccccaataggggggcaagtaccggccaaccagccaccaga
ccagggcgcttgtccagcgaccctaactttgtctctgaggaggagcaaaaccgccgcagg
gccaaaggcctctgcatcaaatgcagtaagatgggccataaatttgcggaatgccgcact
ggctggaaggccacacccaaggaggaaggtgtcaaaaaggaagccgccaagattggcaaa
gaactaagggtacctgctgccgcgcgcaaggaccccaaggactctgggcttattgaaatc
tgtaatatatcgaatagcatcaatagaatttccccactcttcacaatttcaattaagcca
gagaaacaagcagacccactagaagtcctgatagactcaggcgctacatcattgttcctt
caccctcacaccgcggaactactccgcctacccctaatagatctccctcaaccccgtacc
gtaactatgcttgatgggttgagcccccaggctggaaagatttggaagaaggcccaccta
accttcctatttgatggtaaacaaatgacggaaactttcctgatttgcaacaccggatca
cacgctgccatcctaggaattaaatggttagaagcccacaaccctgaaatcaattggaat
tcccgtactctctccttcccacatacgccaccagaacatgcaaccattgctgaggaggag
gaagctgatcaaaaaccccttgaaggagtcccctccaaataccaccaatacgccaaggta
tttggagaggaggaattcaataagcttcccccccataggcattacgatattgggatcaag
ctcacagaggaaggaccccttaactcccccctttatagtatgactgatgccaagtccgcc
accctcaaggactggcttaaggatgaactcaaagctgggaagatccgtcccagcaaatca
cctatcagctccccagtcatgtttgtcccaaaaaaggatggttcccgttgtcttgtagtt
gactattgttgcctcaataaccggacaaaaaagaacgtctatccgttgccttgcccagat
gatctcatggcccagctccgcggcgccaagatctttactaagctagatctaaggtgggga
tacaacaatgtccgggtaaaagaaggtgacaaatggaaaacggccttccgtaccaaatat
ggtttatacgagtccctggtcatgacctttggcctgacaaatgcacctgcagctttccaa
cacttcatgaacaagttgttcaaggatctactggatgtatgcgtcatcatctacctagat
gacatcttgatttactcaaaggatgacgcaactcacacaaaacacgtccatgaggttctg
aagcggttgatggataaccagctcttctgtaaagcgtccaaatgcacgttccacgtcacc
tctgtggaatacctagggattattgtctcggacaagggttttagtctggataagctcaag
atccaggcagtacaagaatggccggttcctacaaaagtcaaagaagtccaatcgttcctg
ggttttgccaactttctccgccgattcgttgccaacttcagtcacatggctagaccattg
cacaatctggtaagaaaggacacaacatggaagtgggacaccagggaacaggaagctttc
cagagccttaaggacgctatcaccaacgccccagtactttgccacgcggatcctaccaaa
ccctatttcctggaaacggatgcatcaggtgcagctctggggtcaatactcagccaacgg
caagaagacggaagactacaccccttggggttcctgtcggaattgttcaaaggtgccaaa
cagaactatgacacccatgacaaggaactcctcgcaatcatccggtcatttgagtattgg
cgaatatttctggaggggacaaaacacccaatcacggttttcacggatcattgcaacctg
gaatactggaaggagtccagaaccttcaatcaacaacacgcacaatggcatctactcctt
gccggttataacttccagattgtctattgccccggaaagcaatcagggaaaccagatgcc
ctctcacgccaatcagaccacgccaatatccctcctgcagtccaaaccatgctcccagac
cccgtattcgcaaacatcgccctagtcacgccggaaaaggagctacaacgccagatcaaa
gcgtccctagatcaagatgagtccctggaggaaatcctccaattcttacagaacgagtcc
aaagcacccccctccatcaaacgcgcattcaaagattacaagatggaggctggattactg
ttctaccaaggacgaatcgtggtccctgacgttggaacattaaggacggatctactccac
atcttccacgacagccccttggcaggacatccgggaagacagcgtaccctagaattggtg
tcaaggaattactactggcccggtatccgtgcggacacatattggcatgtggactcttgt
gaaacatgtcaacggatcagaaagcctaagtacgcctctatcccgcctcagccgcttgaa
cttcctgtcagaccctggcaacacgtatcatacgacatgatagtagacctgcctaaagac
agaagcaacaactccatcctggtcatagtggacagcttcacaaagtatgggatttttgtc
aaatgttccaaaaagctcaaagcccctgaactagcagaattattcctggaacacgtgtgg
aaacggcatggcatgcctgaaaaaacggtctcagacaggggaagggtgttcaacaataag
ttcctgaaggcactatacaaatgcctaggaattgacccccatttctcctcggcgtaccac
ccccagagcgatggacaaacggagcaagtcaacccttccatcaaacacttcctaagggcc
tacttgggggttaaccaacgggactggactaagtggctgccaatggcggaatttgcatac
aacaacgccgtgcacagtagtactgggaaaactcctttcaaggccttatacggatgggaa
cccaccttaaccccatccaacgtacccacagatgtcccagaagcggacaaacttgcccaa
acaatggaagcgcaatggaaggaagtagagtcggccctccggcaagccaagcaacggatg
acagccagagaaagcggaagcccgacggaattcaaaattggagaagaagcttggcttgac
gccaagaatgtcaacctcaaaaccttaagccccaaactaacagaacaacgtttgggcccg
ttcaaggttaccaagaaaatctccgaccgcgcttaccggcttgaactacccccaacaatg
cgcattcacaacgtcttctacgtggggcttctatctaaggtcaaaagggacaacaaacgc
gccttcaagaaccgcccaccaccagtcaccgtggatggggaagaagaatacgaggtggag
gggatcaccaatgctgaagaaaggaacgggaaatggttcttccgagtcaaatggaagggg
tacggatccaaagagaatacatgggaacctcaagaaaacttaaaaaacgccgaaaaaatt
ttagaaaaatacgaaaaggagatgaaaaagaaggcccttggcgctgccaaggcccttaaa
gggggggcagtgttgtag
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