Rhizoctonia solani: RhiXN_05322
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Entry
RhiXN_05322 CDS
T09256
Name
(RefSeq) Retrotransposable element Tf2 protein
Organism
rsx
Rhizoctonia solani
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH
RT_RNaseH_2
Integrase_H2C2
Chromo
rve
RVP_2
Asp_protease_2
zf-H2C2
gag-asp_proteas
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
67027601
NCBI-ProteinID:
XP_043177557
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All DBs
Position
2:complement(join(2235369..2238430,2238499..2238754,2238805..2239211,2239250..2239844))
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AA seq
1439 aa
AA seq
DB search
MQEDQRPVGDKDQGGAQTKPGPLTGPVTPPTHSGGEAHTPGTVRPGLKAPFRPSRGTGFD
SEEEEEPRRAPKREPCDTPKRSLSSLTPFDSGSSVKQPKMELPDPYKGDSRGRKATQWLD
RMLLWVALHRDQFNEEEQMVVWILYHMTDKAADWALPIIGTIIKGKGNPPTTIPALMAKF
KEAFANPDARGRPPGRLPQFRNLMAELDWNTEAYIAQFTCGLHWKVKELLSTKDNIPDND
LEAIFAALVKIDNTRRENKENRPKKASTKAPVATTTSTSTTTTRVRLSKDPNYVTPEERD
CCRASGLCVKCGQKGHGIKQCPNGWKATVKEVAKPPTPKLDNLDSFEFVSLALDSNKKPL
LFIDLYVQNSPAEPLKTLIDSGATSNFISPSIVEKLKIPKTQLENPQVVRMLDGTISQTV
CPIGNTPAILGMTWLTQESPLIDWNLGTVTFPDQVQIASEEEADSNPLSDLPKQYHEFAK
VFGEEEFKVLPPHQEYDIAINLLPDAKLSPGPIYGMTNAESKALKQHIDKELATGKIRPS
TSLAGAPVMFVKKADGSLRLVVDYQKLNDVTHKNVYPLPRQDDLMAKLRNAKLFTKLDLH
WGYNNVRIKEGDEWKTAFRTKYGLFEYLVMPFGLTNALAAFQHFMNDLFRDLIDVTVIIY
LDDILIFSEDPKKHPEHVREVLSRLMRNQLFCKLSKCHFHVTTVDYLGIVISPAGFSMDQ
KKIEAVTSWPQPKTVKQVQAFLGFVNYLRRFIPNFSLVARPLHNLTKKETPWSWDNPEEA
AFQELKTLVTRSPVLIHSNPKLPYYLETDASGVAMGAILSQQGEDNQLHPIAYMSKSFSG
AEANYDTHDKELLAIIKALEEWRIFLEATEKSIQVFTDHRNLEYWMQAQTFNQRHARWRI
FLSDFNFEIHYRPGKQSGKPDALSRRLDYLDVPPEPEVMLPTEVFANTSEEELEIVTKVR
SRLKEDPSLEQIIQFLTEDADNALPSIQKAYQEYDWEEDLLWYRGRLVVPNHKPLKERLL
KEFHDSPLAGHPGQQRTLELLSQNYWWPGMKSSAKEWVEHCPTCQANQRARAPVIALKPL
EVPPYPFHTILYDFITGFPKSQGHDAILVVIDSFSKFGHFIPTSKKVTSKGLADLFITHI
WKLHGLPIKTVSDRGTTFTGKFLQALYQRLGIKPSFSSAYHPESDGQTERVNQFIEFYLR
SYVAANHSDWATWLPLAEYAYNNAKHASTGKTPFELVYGRNPVMNPSNVPANVPEADKVA
DTLAQEWKEAKSALRLSKERMAENQGTIPEYSVGEKVWLDGKNVELRTNSNKLDPRRLGP
FKIIEKVSSHAYRLELLETLKIHNVFYVGLLSKSHEAPSQPFPEQPPPETIEGEEEYEVE
QIIDSKRQRGKWFYLIKWKGYGPEDNSWEPEELLKHSQEEIKRFNQARLRKARDAAKSL
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagaccaacgacctgttggagacaaggatcagggcggagcccaaactaagcct
ggcccattgactgggcctgtcacccctcctacccactcaggaggggaagcccacactcca
ggaacggttaggcctggactcaaggcccctttccgcccatcaagaggaacgggctttgac
tcagaagaagaggaagaacccaggcgagcccctaaaagggagccttgcgacacgcctaaa
cggagcctcagctccctcaccccattcgactcagggtccagcgtaaagcaacccaaaatg
gagctcccagatccatacaagggagactccaggggacggaaggcaacccagtggctagac
cgtatgctgctgtgggttgcgcttcatcgagatcaattcaatgaagaggaacaaatggtt
gtgtggattctataccacatgacagataaagctgccgactgggctctccccattattggg
actattatcaagggcaagggaaatccccccactaccatcccggccttaatggccaaattt
aaagaagcctttgccaacccagatgcaagagggcggccgccaggaagattgccgcaattc
cgcaatctcatggcggaacttgactggaacactgaggcgtacattgcccagtttacgtgc
ggtcttcactggaaggtgaaagaactcctgtccaccaaggacaacattcccgacaatgac
ctggaggccatatttgccgccttggtcaagattgacaacactcgtcgggagaacaaggaa
aaccgccccaagaaggcttccaccaaggctccggttgccacaaccacctctacctccacc
actaccaccagggtccgtttatccaaggaccccaactatgtcaccccggaggaaagggat
tgttgccgcgcatcagggctatgcgtcaaatgcggtcagaagggccacggaatcaagcag
tgcccaaatggctggaaagccacagttaaagaagtagccaagcccccaactcccaaattg
gacaatctagatagttttgaatttgtatctcttgctctagactcaaataaaaaacccctc
ttatttattgatctatatgtccaaaattccccggcagaacccctcaaaacactcatagat
tccggagccacatcaaattttatttccccatcgattgtggaaaaattaaaaatcccaaaa
acccaactcgaaaacccacaagttgtgagaatgctagatggtacaatctctcagactgtc
tgccccattgggaacacacccgccatacttggcatgacatggctcactcaggagtcaccc
ctcatagactggaatctaggcaccgtcaccttcccagaccaagtccagatagcctcggaa
gaagaagcagactctaaccccttgtcagacctcccaaagcaataccatgaatttgctaaa
gtctttggcgaagaagaattcaaggtgcttcccccacatcaggaatatgatatagccatc
aatctcctgcccgatgccaagctttctcccggacccatttacggcatgaccaatgcagaa
tccaaagcgctaaagcaacacatcgacaaggaactggcaacaggcaagatccgccctagt
acctccttggcaggcgccccggtcatgtttgtgaaaaaggcagatggatctctcaggcta
gttgtggattaccaaaagctcaatgacgtaacccataaaaatgtttaccctctaccaagg
caggatgacctcatggccaaactcaggaacgccaaactattcaccaagctagacctgcat
tggggttataataacgtccggatcaaggaaggtgatgaatggaagacagccttccgcacc
aaatatgggttatttgagtacttggtcatgccctttggtcttacaaacgccctggcagca
tttcagcacttcatgaatgacttgttcagggacctcattgacgtcacagtgataatttac
ttggatgacatcctcattttctcagaagaccccaaaaagcaccctgaacacgttagggaa
gtcctatcaagactaatgagaaaccagttgttttgtaaactctccaagtgccacttccac
gtcactaccgttgattaccttggcattgtcatatccccggcgggcttctccatggatcag
aagaagattgaggcggtcacgtcatggccccaacctaaaacagttaagcaggtccaagca
tttttaggttttgtcaactacctccgtcgtttcatccccaacttcagcttggtggcacgc
cccctccataatctcacaaagaaggaaaccccctggtcatgggacaatccagaggaagct
gcattccaggaattaaaaacccttgtcaccagatccccggttcttattcactccaaccca
aaactgccctattacctagagacggacgcatcaggggtagccatgggagccatactgagt
caacaaggagaggataaccaactccatccaattgcatacatgtctaagtccttctcaggc
gccgaggctaactatgatacgcacgacaaagaattattagctatcattaaagcactagag
gaatggcgaatcttcctggaggctacggaaaaatcaattcaggttttcacagatcataga
aacctggaatactggatgcaggcacaaacctttaatcaaagacacgcaagatggcgcatt
ttccttagtgacttcaattttgagattcactaccgccctggaaagcagtcagggaaacca
gacgccctatccagacgattggattacctggatgtaccaccggaaccagaagtcatgctt
ccaacagaggtctttgcaaacacgtcagaagaagagctggagattgtcaccaaagtacgc
tccaggttgaaagaagacccttccctagaacaaattatccagtttctaacagaagacgct
gataacgccctgccatccatacaaaaggcataccaagaatatgactgggaggaagaccta
ctctggtatcgtgggagactagtggtacccaaccacaagcccctaaaagaaagactactg
aaggaatttcacgactctcccctggcaggacacccaggtcagcaaagaaccctagagctc
ctaagtcaaaactactggtggccaggcatgaaatcctcagccaaggaatgggtggaacat
tgcccaacttgccaagcaaatcaacgagcccgcgcaccggtaatagctctgaaacccctg
gaagtcccaccgtatccttttcacactatattgtacgacttcatcaccgggttccccaag
tcccaaggccatgatgctatccttgtggttattgattcattttcaaagtttgggcacttc
atccctacatccaagaaggtcacatccaaagggttggcggacttattcataacgcatatc
tggaaactccacggcttaccaatcaaaaccgtctcagaccgcggaaccacattcactgga
aagtttctccaagcactctaccaaaggttggggatcaaaccctccttctcctctgcttac
cacccagaatccgacggacagacagaaagggttaatcaatttatcgaattctacctaagg
tcatatgtagcagccaatcactcagactgggccacttggcttcccttggcagaatatgcg
tataataacgccaaacacgcgtccacaggaaaaacccccttcgaactggtttacggaagg
aatccagtgatgaacccctccaatgtcccagccaacgtaccagaggcagataaggtagca
gatactctagctcaggaatggaaagaagccaagtcagccctcagactaagcaaggaacgg
atggccgagaaccaaggaacaataccagagtattcagtaggagaaaaggtttggctggac
ggaaagaacgtagaattaaggaccaattcaaataagctggaccccagacgacttggcccc
ttcaaaatcattgaaaaggtctccagtcatgcctaccgcctagaattactggaaaccttg
aaaatccacaatgtcttctacgttgggttattgtccaaaagtcacgaagccccgagccag
ccatttccagaacaacctccccctgaaacaatagagggagaagaagaatacgaggtagag
cagatcattgattccaagagacaacggggaaaatggttttacctaataaaatggaaaggt
tacggtccagaggacaactcctgggagcccgaggagctattaaaacacagccaggaagag
atcaagcgcttcaaccaggccagactcagaaaggctcgtgacgccgccaagagcctttaa
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