Rhizoctonia solani: RhiXN_06064
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Entry
RhiXN_06064 CDS
T09256
Name
(RefSeq) pumilio homology domain family member 4
KO
K14844
pumilio homology domain family member 6
Organism
rsx
Rhizoctonia solani
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_06064
03009 Ribosome biogenesis [BR:
rsx03009
]
RhiXN_06064
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
RhiXN_06064
Ribosome biogenesis [BR:
rsx03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
RhiXN_06064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
Motif
Other DBs
NCBI-GeneID:
67028343
NCBI-ProteinID:
XP_043181312
LinkDB
All DBs
Position
6:join(2055033..2055294,2055346..2055572,2055623..2055715,2055768..2055796,2055847..2056036,2056137..2056222,2056326..2056463,2056530..2056614,2056668..2056768,2056831..2056864,2056917..2057211,2057277..2057710)
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AA seq
657 aa
AA seq
DB search
MAQLKKSSQSKKRGATGSSGLSAPAAKKSKVESNDKRRAVPVTAKVVPVVESEVSDEEDW
EDEQELESGDEQANEGPLTAKAPKDPQASREGHKAQKELQAQRRASKPHSALLVEAKRVW
ALARKIDIPRAERQKHIEELMNVLRGNVQDIVFKHDASRIVQTLVKYGGQKERDEVAAEL
KGKYRDLAQNKYGKFLVTKLIRYCNAHRTAILSEFHNHVIRLLLHREASPIIADTFDLYA
STGERNLLLRDFYGKEVALFDSASIQTGGLRAALEHAAPERRKRILASVAETLMQIFNNP
DKGAVSHSIVHRVLWEYLNELALLEDSDKEDVERLRRELFDTCQELLAEMVHTKDGSRAV
REFIARGTAKDRKQIIKTLKPHIEKICGDEEAQLVLFTIFDLVDDTKLVGKSLVTDITSL
SPSLSRTLARRVLLYLLVPRTPRHFTPALLRTISQTDFAQGTTSKKDPEIRRAELRAAAS
PGMVKAIEDDAEALVRDRGASVFVGEVMLFAQGDKSKALDALLSPISSPYAPPDPESDLS
DPTITTHILNLSHASRLYKTLVQGGHYNQQTKSIERSEQAPKSVPKKFMYVAGKENVVSM
ALGEGGFIVAEVVGKLKDEGDYDDLKEIRSWFKKDARDKLGKGDIRGSAVLLERLRE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattaaagaaatcgagccagtccaaaaagcgtggtgcgacaggatcgtctggt
ctctctgctccagctgcaaagaagagcaaagttgaaagcaatgacaagcgaagggccgtt
cccgttacggcaaaagtagtgccagttgtggaatcagaggttagcgacgaggaggattgg
gaggatgagcaagagttggaatcaggagacgaacaggctaatgagggtccattaaccgcc
aaggctcctaaggatccccaagcttctcgagagggacataaagcacaaaaggagcttcaa
gctcagcgccgagcttcaaagccccattcagctttactggtcgaagccaagcgagtctgg
gcactagctcgcaagatcgacattccccgtgctgaacgacaaaagcacatcgaagagctt
atgaacgtactcagagggaacgttcaagatatcgtgttcaagcatgatgccagtcgaatt
gtccagacactggttaaatatggtgggcagaaggagcgagatgaggtagccgcggagctc
aagggcaaataccgagatttggcgcaaaacaagtacggaaagtttctcgtaacaaaattg
atacggtattgcaacgcccaccgcaccgccattctatccgaatttcataaccatgttatt
cgattacttcttcaccgtgaagcctcgcccatcatcgccgatactttcgacttgtatgca
tcgactggagaacggaatctgctattgagagatttctatgggaaggaggtggctttgttt
gactctgcatcaatccagactggaggtttacgggccgcattggaacatgctgcgcccgaa
cgaagaaagcgaatactagcgtcggtggcagagacattgatgcaaatatttaataacccc
gacaaaggcgcagtttcccattcgattgtacacagagttttgtgggaatatttgaacgag
ctggctctattggaagactcggacaaggaagacgtggaacgactaagaagggaattgttc
gatacctgccaggaattacttgccgaaatggttcacacaaaagacggaagtcgagcagtt
cgtgagtttattgcaagaggtaccgccaaggaccgaaaacaaattatcaaaacgctcaaa
ccgcatatcgaaaagatttgcggtgatgaagaggctcagcttgtgctctttacaatattc
gatttggtcgatgacaccaaattagttggaaaatcgctcgttacagatatcacctccctt
tctccttcgttatcccgcacacttgctcggcgggttctcctctacctcctcgtaccaaga
actcctcgccatttcacccctgctctacttcgcacgatatcacagacagactttgcccag
ggcacaacgagcaaaaaggacccggaaattcggcgggctgagttacgggctgcagcaagc
cccgggatggtcaaagctatcgaggacgacgcagaggcattggtaagagaccggggcgca
tccgtctttgtcggtgaagtcatgttatttgctcaaggcgacaaatccaaagcgctggat
gctcttctttcccctatctcaagcccatacgctccccctgaccccgaatccgatttatcc
gacccgaccataaccacacatatcctcaacctctcccacgcttctcggctctacaagact
cttgtccaaggcgggcactataaccagcaaaccaaaagcatcgagcgttccgaacaagcg
cccaaaagcgtgcctaagaagtttatgtatgtcgctggaaaggagaatgtagtatctatg
gctcttggtgaaggcggctttatcgtcgctgaagtggttggaaagctcaaggacgaaggg
gattacgatgatctcaaagagatacgttcctggttcaagaaggatgcgagagacaagttg
ggtaaaggagatattaggggctcagcggtgttattagagaggttgcgcgagtag
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